Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC8.4□□□□□ -1.07
Gm3880A0A1B0GSB3 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Gm3880A0A1B0GSB3 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Gm3880A0A1B0GSB3 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC8.39□□□□□ -1.07
Gm3880A0A1B0GSB3 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Gm3880A0A1B0GSB3 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Gm3880A0A1B0GSB3 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Gm3880A0A1B0GSB3 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC8.39□□□□□ -1.07
Gm3880A0A1B0GSB3 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Gm3880A0A1B0GSB3 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC8.39□□□□□ -1.07
Gm3880A0A1B0GSB3 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Gm3880A0A1B0GSB3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Gm3880A0A1B0GSB3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Gm3880A0A1B0GSB3 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Gm3880A0A1B0GSB3 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Gm3880A0A1B0GSB3 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Gm3880A0A1B0GSB3 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Gm3880A0A1B0GSB3 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Gm3880A0A1B0GSB3 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Gm3880A0A1B0GSB3 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Gm3880A0A1B0GSB3 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Gm3880A0A1B0GSB3 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Gm3880A0A1B0GSB3 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Gm3880A0A1B0GSB3 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Gm3880A0A1B0GSB3 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC8.37□□□□□ -1.07
Gm3880A0A1B0GSB3 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Gm3880A0A1B0GSB3 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Gm3880A0A1B0GSB3 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Gm3880A0A1B0GSB3 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Gm3880A0A1B0GSB3 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Gm3880A0A1B0GSB3 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Gm3880A0A1B0GSB3 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC8.37□□□□□ -1.07
Gm3880A0A1B0GSB3 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Gm3880A0A1B0GSB3 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Gm3880A0A1B0GSB3 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC8.37□□□□□ -1.07
Gm3880A0A1B0GSB3 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Gm3880A0A1B0GSB3 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Gm3880A0A1B0GSB3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Gm3880A0A1B0GSB3 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC8.37□□□□□ -1.07
Gm3880A0A1B0GSB3 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC8.37□□□□□ -1.07
Gm3880A0A1B0GSB3 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Gm3880A0A1B0GSB3 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC8.37□□□□□ -1.07
Gm3880A0A1B0GSB3 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC8.37□□□□□ -1.07
Gm3880A0A1B0GSB3 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Gm3880A0A1B0GSB3 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Gm3880A0A1B0GSB3 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Gm3880A0A1B0GSB3 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC8.37□□□□□ -1.07
Gm3880A0A1B0GSB3 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC8.37□□□□□ -1.07
Gm3880A0A1B0GSB3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Gm3880A0A1B0GSB3 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Gm3880A0A1B0GSB3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Gm3880A0A1B0GSB3 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms