Protein–RNA interactions for Protein: A0A140T8M3

Igkv8-30, Immunoglobulin kappa chain variable 8-30 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-30A0A140T8M3 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-30A0A140T8M3 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-30A0A140T8M3 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-30A0A140T8M3 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-30A0A140T8M3 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-30A0A140T8M3 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC10.75□□□□□ -0.69
Igkv8-30A0A140T8M3 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-30A0A140T8M3 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-30A0A140T8M3 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Igkv8-30A0A140T8M3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-30A0A140T8M3 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-30A0A140T8M3 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
Igkv8-30A0A140T8M3 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-30A0A140T8M3 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-30A0A140T8M3 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-30A0A140T8M3 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-30A0A140T8M3 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC10.74□□□□□ -0.69
Igkv8-30A0A140T8M3 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-30A0A140T8M3 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
Igkv8-30A0A140T8M3 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-30A0A140T8M3 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC10.74□□□□□ -0.69
Igkv8-30A0A140T8M3 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-30A0A140T8M3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-30A0A140T8M3 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
Igkv8-30A0A140T8M3 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-30A0A140T8M3 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-30A0A140T8M3 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-30A0A140T8M3 Mir8112-201ENSMUST00000184382 131 ntBASIC10.74□□□□□ -0.69
Igkv8-30A0A140T8M3 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Igkv8-30A0A140T8M3 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Igkv8-30A0A140T8M3 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Igkv8-30A0A140T8M3 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-30A0A140T8M3 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-30A0A140T8M3 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-30A0A140T8M3 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-30A0A140T8M3 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
Igkv8-30A0A140T8M3 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC10.74□□□□□ -0.69
Igkv8-30A0A140T8M3 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Igkv8-30A0A140T8M3 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-30A0A140T8M3 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-30A0A140T8M3 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-30A0A140T8M3 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC10.74□□□□□ -0.69
Igkv8-30A0A140T8M3 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-30A0A140T8M3 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-30A0A140T8M3 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-30A0A140T8M3 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-30A0A140T8M3 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-30A0A140T8M3 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-30A0A140T8M3 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Igkv8-30A0A140T8M3 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-30A0A140T8M3 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-30A0A140T8M3 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-30A0A140T8M3 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Igkv8-30A0A140T8M3 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-30A0A140T8M3 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-30A0A140T8M3 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-30A0A140T8M3 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-30A0A140T8M3 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC10.73□□□□□ -0.69
Igkv8-30A0A140T8M3 Gm38205-201ENSMUST00000192243 258 ntBASIC10.73□□□□□ -0.69
Igkv8-30A0A140T8M3 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Igkv8-30A0A140T8M3 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-30A0A140T8M3 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-30A0A140T8M3 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-30A0A140T8M3 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-30A0A140T8M3 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-30A0A140T8M3 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-30A0A140T8M3 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-30A0A140T8M3 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-30A0A140T8M3 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-30A0A140T8M3 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-30A0A140T8M3 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-30A0A140T8M3 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Igkv8-30A0A140T8M3 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-30A0A140T8M3 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
Igkv8-30A0A140T8M3 AC093043.3-201ENSMUST00000226531 2273 ntBASIC10.73□□□□□ -0.69
Igkv8-30A0A140T8M3 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-30A0A140T8M3 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC10.73□□□□□ -0.69
Igkv8-30A0A140T8M3 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-30A0A140T8M3 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv8-30A0A140T8M3 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv8-30A0A140T8M3 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Igkv8-30A0A140T8M3 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC10.72□□□□□ -0.69
Igkv8-30A0A140T8M3 AC153526.5-201ENSMUST00000218661 2147 ntBASIC10.72□□□□□ -0.69
Igkv8-30A0A140T8M3 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC10.72□□□□□ -0.69
Igkv8-30A0A140T8M3 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv8-30A0A140T8M3 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv8-30A0A140T8M3 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv8-30A0A140T8M3 Gm43598-201ENSMUST00000202482 2479 ntBASIC10.72□□□□□ -0.69
Igkv8-30A0A140T8M3 Gm11421-201ENSMUST00000122124 294 ntBASIC10.72□□□□□ -0.69
Igkv8-30A0A140T8M3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC10.72□□□□□ -0.69
Igkv8-30A0A140T8M3 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC10.72□□□□□ -0.69
Igkv8-30A0A140T8M3 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv8-30A0A140T8M3 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Igkv8-30A0A140T8M3 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv8-30A0A140T8M3 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv8-30A0A140T8M3 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Igkv8-30A0A140T8M3 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv8-30A0A140T8M3 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv8-30A0A140T8M3 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv8-30A0A140T8M3 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms