Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 Gm29791-202ENSMUST00000207888 369 ntBASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-27A0A0G2JF28 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-27A0A0G2JF28 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-27A0A0G2JF28 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-27A0A0G2JF28 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Igkv8-27A0A0G2JF28 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC10.63□□□□□ -0.71
Igkv8-27A0A0G2JF28 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC10.63□□□□□ -0.71
Igkv8-27A0A0G2JF28 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Igkv8-27A0A0G2JF28 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-27A0A0G2JF28 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-27A0A0G2JF28 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-27A0A0G2JF28 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-27A0A0G2JF28 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-27A0A0G2JF28 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-27A0A0G2JF28 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-27A0A0G2JF28 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Igkv8-27A0A0G2JF28 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-27A0A0G2JF28 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-27A0A0G2JF28 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC10.63□□□□□ -0.71
Igkv8-27A0A0G2JF28 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC10.63□□□□□ -0.71
Igkv8-27A0A0G2JF28 Gm15820-201ENSMUST00000201566 728 ntBASIC10.63□□□□□ -0.71
Igkv8-27A0A0G2JF28 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC10.63□□□□□ -0.71
Igkv8-27A0A0G2JF28 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC10.63□□□□□ -0.71
Igkv8-27A0A0G2JF28 Golgb1-201ENSMUST00000023534 498 ntBASIC10.63□□□□□ -0.71
Igkv8-27A0A0G2JF28 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-27A0A0G2JF28 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-27A0A0G2JF28 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-27A0A0G2JF28 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-27A0A0G2JF28 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-27A0A0G2JF28 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-27A0A0G2JF28 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-27A0A0G2JF28 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Igkv8-27A0A0G2JF28 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-27A0A0G2JF28 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-27A0A0G2JF28 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC10.63□□□□□ -0.71
Igkv8-27A0A0G2JF28 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-27A0A0G2JF28 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-27A0A0G2JF28 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-27A0A0G2JF28 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Igkv8-27A0A0G2JF28 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC10.62□□□□□ -0.71
Igkv8-27A0A0G2JF28 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Igkv8-27A0A0G2JF28 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Igkv8-27A0A0G2JF28 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Igkv8-27A0A0G2JF28 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC10.62□□□□□ -0.71
Igkv8-27A0A0G2JF28 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Igkv8-27A0A0G2JF28 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Igkv8-27A0A0G2JF28 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
Igkv8-27A0A0G2JF28 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Igkv8-27A0A0G2JF28 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Igkv8-27A0A0G2JF28 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Igkv8-27A0A0G2JF28 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Igkv8-27A0A0G2JF28 Gm12251-201ENSMUST00000117893 792 ntBASIC10.62□□□□□ -0.71
Igkv8-27A0A0G2JF28 Flvcr1-202ENSMUST00000191946 1216 ntBASIC10.62□□□□□ -0.71
Igkv8-27A0A0G2JF28 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Igkv8-27A0A0G2JF28 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Igkv8-27A0A0G2JF28 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Igkv8-27A0A0G2JF28 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Igkv8-27A0A0G2JF28 Tfap2a-209ENSMUST00000225180 1828 ntBASIC10.62□□□□□ -0.71
Igkv8-27A0A0G2JF28 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Igkv8-27A0A0G2JF28 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Igkv8-27A0A0G2JF28 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Igkv8-27A0A0G2JF28 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Igkv8-27A0A0G2JF28 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Igkv8-27A0A0G2JF28 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Igkv8-27A0A0G2JF28 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Igkv8-27A0A0G2JF28 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Igkv8-27A0A0G2JF28 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Igkv8-27A0A0G2JF28 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-27A0A0G2JF28 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC10.61□□□□□ -0.71
Igkv8-27A0A0G2JF28 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-27A0A0G2JF28 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC10.61□□□□□ -0.71
Igkv8-27A0A0G2JF28 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms