Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-3A0A075B648 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav12-3A0A075B648 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-3A0A075B648 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-3A0A075B648 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-3A0A075B648 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav12-3A0A075B648 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-3A0A075B648 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-3A0A075B648 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Trav12-3A0A075B648 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-3A0A075B648 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav12-3A0A075B648 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Trav12-3A0A075B648 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-3A0A075B648 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-3A0A075B648 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-3A0A075B648 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-3A0A075B648 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-3A0A075B648 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-3A0A075B648 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-3A0A075B648 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-3A0A075B648 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-3A0A075B648 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-3A0A075B648 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-3A0A075B648 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-3A0A075B648 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-3A0A075B648 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-3A0A075B648 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-3A0A075B648 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-3A0A075B648 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-3A0A075B648 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-3A0A075B648 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-3A0A075B648 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav12-3A0A075B648 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-3A0A075B648 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.34□□□□□ -0.43
Trav12-3A0A075B648 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-3A0A075B648 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-3A0A075B648 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav12-3A0A075B648 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC12.34□□□□□ -0.43
Trav12-3A0A075B648 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav12-3A0A075B648 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC12.34□□□□□ -0.43
Trav12-3A0A075B648 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC12.34□□□□□ -0.43
Trav12-3A0A075B648 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav12-3A0A075B648 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-3A0A075B648 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-3A0A075B648 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Trav12-3A0A075B648 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-3A0A075B648 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav12-3A0A075B648 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-3A0A075B648 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-3A0A075B648 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-3A0A075B648 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-3A0A075B648 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav12-3A0A075B648 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-3A0A075B648 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-3A0A075B648 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-3A0A075B648 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-3A0A075B648 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav12-3A0A075B648 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-3A0A075B648 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-3A0A075B648 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-3A0A075B648 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-3A0A075B648 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-3A0A075B648 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav12-3A0A075B648 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav12-3A0A075B648 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-3A0A075B648 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-3A0A075B648 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-3A0A075B648 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-3A0A075B648 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-3A0A075B648 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-3A0A075B648 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-3A0A075B648 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-3A0A075B648 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-3A0A075B648 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav12-3A0A075B648 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav12-3A0A075B648 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav12-3A0A075B648 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC12.33□□□□□ -0.44
Trav12-3A0A075B648 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav12-3A0A075B648 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-3A0A075B648 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-3A0A075B648 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-3A0A075B648 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-3A0A075B648 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav12-3A0A075B648 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-3A0A075B648 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-3A0A075B648 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-3A0A075B648 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-3A0A075B648 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav12-3A0A075B648 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-3A0A075B648 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-3A0A075B648 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-3A0A075B648 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-3A0A075B648 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-3A0A075B648 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-3A0A075B648 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12-3A0A075B648 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12-3A0A075B648 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12-3A0A075B648 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12-3A0A075B648 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav12-3A0A075B648 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms