Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
VPS29Q9UBQ0 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 AL138820.1-201ENST00000617901 5305 ntBASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 RN7SKP69-201ENST00000365390 305 ntBASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 RNA5SP122-201ENST00000384457 108 ntBASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 RNA5SP241-201ENST00000391326 114 ntBASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 AC079809.1-201ENST00000415468 276 ntBASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 RPS3P2-201ENST00000421346 701 ntBASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 MRPS21P2-201ENST00000424704 264 ntBASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 RPL7AP49-201ENST00000429522 581 ntBASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 AL591438.1-201ENST00000433508 581 ntBASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 FMO7P-201ENST00000436045 768 ntBASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 IGBP1P4-201ENST00000503202 879 ntBASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 MTND6P2-201ENST00000512226 524 ntBASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 CDC42P3-201ENST00000518493 633 ntBASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 OR8G3P-201ENST00000533406 921 ntBASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 AP000769.2-201ENST00000602344 396 ntBASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 AC027243.2-201ENST00000602530 724 ntBASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 AL118522.2-201ENST00000616045 615 ntBASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VPS29Q9UBQ0 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 AP001284.1-201ENST00000528393 2118 ntBASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 SNORA48.4-201ENST00000391089 134 ntBASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 AL596448.1-201ENST00000415024 392 ntBASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 VTI1BP4-201ENST00000427516 527 ntBASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 AC002504.1-201ENST00000438281 691 ntBASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 AC019185.1-201ENST00000442718 389 ntBASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 RN7SL72P-201ENST00000460697 269 ntBASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 PSMA2P2-201ENST00000504319 686 ntBASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 AC138866.2-201ENST00000508650 584 ntBASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 SNORD46.2-201ENST00000516021 102 ntBASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 AC010547.6-201ENST00000571789 193 ntBASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 AC244107.2-201ENST00000611773 76 ntBASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 AC132068.1-201ENST00000623805 459 ntBASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 CU639417.4-201ENST00000623928 207 ntBASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
VPS29Q9UBQ0 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.19□□□□□ -1.58
VPS29Q9UBQ0 AC079298.1-201ENST00000625026 1619 ntBASIC5.19□□□□□ -1.58
VPS29Q9UBQ0 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms