Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
CCDC88CQ9P219 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
CCDC88CQ9P219 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC88CQ9P219 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC88CQ9P219 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC88CQ9P219 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC88CQ9P219 RN7SKP160-201ENST00000363804 340 ntBASIC5.25□□□□□ -1.57
CCDC88CQ9P219 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CCDC88CQ9P219 AL357752.1-201ENST00000412817 349 ntBASIC5.25□□□□□ -1.57
CCDC88CQ9P219 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC88CQ9P219 CYCSP12-201ENST00000437729 300 ntBASIC5.25□□□□□ -1.57
CCDC88CQ9P219 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC88CQ9P219 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC88CQ9P219 RN7SL583P-201ENST00000475692 287 ntBASIC5.25□□□□□ -1.57
CCDC88CQ9P219 AC074386.1-201ENST00000476560 767 ntBASIC5.25□□□□□ -1.57
CCDC88CQ9P219 RPL7P6-201ENST00000480903 738 ntBASIC5.25□□□□□ -1.57
CCDC88CQ9P219 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.25□□□□□ -1.57
CCDC88CQ9P219 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC88CQ9P219 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC88CQ9P219 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.25□□□□□ -1.57
CCDC88CQ9P219 SCARNA20.4-201ENST00000516969 131 ntBASIC5.25□□□□□ -1.57
CCDC88CQ9P219 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC88CQ9P219 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC88CQ9P219 RBM22P12-201ENST00000567098 1255 ntBASIC5.25□□□□□ -1.57
CCDC88CQ9P219 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC88CQ9P219 AL512329.2-201ENST00000607350 548 ntBASIC5.25□□□□□ -1.57
CCDC88CQ9P219 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.25□□□□□ -1.57
CCDC88CQ9P219 AC016745.2-201ENST00000608834 3443 ntBASIC5.25□□□□□ -1.57
CCDC88CQ9P219 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC88CQ9P219 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
CCDC88CQ9P219 ABCC13-202ENST00000463099 3842 ntBASIC5.25□□□□□ -1.57
CCDC88CQ9P219 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC88CQ9P219 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC88CQ9P219 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.25□□□□□ -1.57
CCDC88CQ9P219 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC88CQ9P219 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC88CQ9P219 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC88CQ9P219 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 RN7SKP185-201ENST00000362813 326 ntBASIC5.24□□□□□ -1.57
CCDC88CQ9P219 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 NENFP1-201ENST00000419476 466 ntBASIC5.24□□□□□ -1.57
CCDC88CQ9P219 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 AL354766.1-201ENST00000423396 542 ntBASIC5.24□□□□□ -1.57
CCDC88CQ9P219 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 SEPT10P1-201ENST00000517342 1162 ntBASIC5.24□□□□□ -1.57
CCDC88CQ9P219 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 OR8G3P-201ENST00000533406 921 ntBASIC5.24□□□□□ -1.57
CCDC88CQ9P219 AL121594.2-201ENST00000541658 472 ntBASIC5.24□□□□□ -1.57
CCDC88CQ9P219 AC051619.2-201ENST00000559063 397 ntBASIC5.24□□□□□ -1.57
CCDC88CQ9P219 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 AL513327.3-201ENST00000602618 469 ntBASIC5.24□□□□□ -1.57
CCDC88CQ9P219 AC109583.2-201ENST00000617367 129 ntBASIC5.24□□□□□ -1.57
CCDC88CQ9P219 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 AP001153.1-201ENST00000641024 338 ntBASIC5.24□□□□□ -1.57
CCDC88CQ9P219 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 TAAR4P-201ENST00000454843 1039 ntBASIC5.24□□□□□ -1.57
CCDC88CQ9P219 RPL35AP19-201ENST00000469425 329 ntBASIC5.24□□□□□ -1.57
CCDC88CQ9P219 RPL15P21-201ENST00000495592 567 ntBASIC5.24□□□□□ -1.57
CCDC88CQ9P219 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 AC108738.1-201ENST00000603703 237 ntBASIC5.24□□□□□ -1.57
CCDC88CQ9P219 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC88CQ9P219 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC88CQ9P219 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC88CQ9P219 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CCDC88CQ9P219 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC88CQ9P219 AL133388.1-201ENST00000404509 287 ntBASIC5.23□□□□□ -1.57
CCDC88CQ9P219 Z93019.1-201ENST00000416450 973 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms