Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 AL159987.1-201ENST00000347911 293 ntBASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 SNORA58B-201ENST00000364259 136 ntBASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 RNU6-171P-201ENST00000384354 107 ntBASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 AL589994.1-201ENST00000404962 340 ntBASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 RNU4-34P-201ENST00000410431 124 ntBASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 CUBNP2-201ENST00000443534 1139 ntBASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 VN1R96P-201ENST00000446052 858 ntBASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 AL162739.1-201ENST00000450606 307 ntBASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 AC011225.1-201ENST00000457751 369 ntBASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 AP002371.1-201ENST00000463604 433 ntBASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 RPL35AP19-201ENST00000469425 329 ntBASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 AC006539.1-201ENST00000481419 501 ntBASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 UBA52P7-201ENST00000486088 380 ntBASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 TRBV5-2-201ENST00000489095 273 ntBASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 RN7SL547P-201ENST00000490793 290 ntBASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 AC021678.3-201ENST00000517893 476 ntBASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 MTND2P17-201ENST00000550281 688 ntBASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 AC092944.2-201ENST00000605443 889 ntBASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 Z95327.3-201ENST00000610385 572 ntBASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 AC016769.4-201ENST00000616893 535 ntBASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TM9SF3Q9HD45 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 RNA5SP453-201ENST00000362503 119 ntBASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 RNU1-19P-201ENST00000363306 165 ntBASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 SNORA74A-201ENST00000364089 198 ntBASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 SPTLC1P2-201ENST00000407089 121 ntBASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 DPPA2P3-201ENST00000411853 655 ntBASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 AL450996.1-201ENST00000445574 1202 ntBASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 AL606490.1-201ENST00000452266 765 ntBASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 AC098583.1-201ENST00000480875 255 ntBASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 ST13P12-201ENST00000508958 1094 ntBASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 SNORA70.11-201ENST00000515987 138 ntBASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 SNORA70.13-201ENST00000516116 138 ntBASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 snoU109.5-201ENST00000516231 132 ntBASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 AC139365.2-201ENST00000517972 253 ntBASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 AC020937.1-201ENST00000519677 1013 ntBASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 NRBF2P4-201ENST00000520874 850 ntBASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 AP000859.1-201ENST00000525536 307 ntBASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 RBM22P12-201ENST00000567098 1255 ntBASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 AC015720.2-201ENST00000567709 334 ntBASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 FKBP1AP1-201ENST00000594588 318 ntBASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 AC008536.1-201ENST00000602872 669 ntBASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 AC096586.2-201ENST00000610260 441 ntBASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms