Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.18□□□□□ -1.42
CCSER1Q9C0I3 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCSER1Q9C0I3 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CCSER1Q9C0I3 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
CCSER1Q9C0I3 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
CCSER1Q9C0I3 AC012078.1-201ENST00000405035 1646 ntBASIC6.17□□□□□ -1.42
CCSER1Q9C0I3 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCSER1Q9C0I3 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCSER1Q9C0I3 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.17□□□□□ -1.42
CCSER1Q9C0I3 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.17□□□□□ -1.42
CCSER1Q9C0I3 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCSER1Q9C0I3 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCSER1Q9C0I3 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCSER1Q9C0I3 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
CCSER1Q9C0I3 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCSER1Q9C0I3 SNORA70.6-201ENST00000383934 134 ntBASIC6.17□□□□□ -1.42
CCSER1Q9C0I3 SNORD56.6-201ENST00000384569 71 ntBASIC6.17□□□□□ -1.42
CCSER1Q9C0I3 OR2AT2P-201ENST00000413438 905 ntBASIC6.17□□□□□ -1.42
CCSER1Q9C0I3 OR6E1P-201ENST00000414424 923 ntBASIC6.17□□□□□ -1.42
CCSER1Q9C0I3 AL354766.1-201ENST00000423396 542 ntBASIC6.17□□□□□ -1.42
CCSER1Q9C0I3 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.17□□□□□ -1.42
CCSER1Q9C0I3 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.17□□□□□ -1.42
CCSER1Q9C0I3 AC023141.9-201ENST00000458734 412 ntBASIC6.17□□□□□ -1.42
CCSER1Q9C0I3 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.17□□□□□ -1.42
CCSER1Q9C0I3 AC074087.1-201ENST00000512059 724 ntBASIC6.17□□□□□ -1.42
CCSER1Q9C0I3 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.17□□□□□ -1.42
CCSER1Q9C0I3 SCARNA20.4-201ENST00000516969 131 ntBASIC6.17□□□□□ -1.42
CCSER1Q9C0I3 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.17□□□□□ -1.42
CCSER1Q9C0I3 OR11H3P-201ENST00000554547 982 ntBASIC6.17□□□□□ -1.42
CCSER1Q9C0I3 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.17□□□□□ -1.42
CCSER1Q9C0I3 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.17□□□□□ -1.42
CCSER1Q9C0I3 RBM22P12-201ENST00000567098 1255 ntBASIC6.17□□□□□ -1.42
CCSER1Q9C0I3 MIR4433B-201ENST00000581329 102 ntBASIC6.17□□□□□ -1.42
CCSER1Q9C0I3 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.17□□□□□ -1.42
CCSER1Q9C0I3 AC015849.6-201ENST00000605454 474 ntBASIC6.17□□□□□ -1.42
CCSER1Q9C0I3 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCSER1Q9C0I3 AL356608.1-201ENST00000610034 820 ntBASIC6.17□□□□□ -1.42
CCSER1Q9C0I3 AL118522.2-201ENST00000616045 615 ntBASIC6.17□□□□□ -1.42
CCSER1Q9C0I3 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.17□□□□□ -1.42
CCSER1Q9C0I3 AC135068.5-201ENST00000624197 983 ntBASIC6.17□□□□□ -1.42
CCSER1Q9C0I3 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCSER1Q9C0I3 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCSER1Q9C0I3 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CCSER1Q9C0I3 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
CCSER1Q9C0I3 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCSER1Q9C0I3 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CCSER1Q9C0I3 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCSER1Q9C0I3 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCSER1Q9C0I3 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.16□□□□□ -1.42
CCSER1Q9C0I3 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CCSER1Q9C0I3 AL050305.1-201ENST00000399993 1230 ntBASIC6.16□□□□□ -1.42
CCSER1Q9C0I3 RPL5P2-201ENST00000429598 854 ntBASIC6.16□□□□□ -1.42
CCSER1Q9C0I3 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.16□□□□□ -1.42
CCSER1Q9C0I3 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.16□□□□□ -1.42
CCSER1Q9C0I3 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.16□□□□□ -1.42
CCSER1Q9C0I3 AL035090.1-201ENST00000454835 332 ntBASIC6.16□□□□□ -1.42
CCSER1Q9C0I3 RNU7-157P-201ENST00000459600 66 ntBASIC6.16□□□□□ -1.42
CCSER1Q9C0I3 RN7SL174P-201ENST00000475578 289 ntBASIC6.16□□□□□ -1.42
CCSER1Q9C0I3 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.16□□□□□ -1.42
CCSER1Q9C0I3 AC109481.1-201ENST00000509173 282 ntBASIC6.16□□□□□ -1.42
CCSER1Q9C0I3 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.16□□□□□ -1.42
CCSER1Q9C0I3 AC027544.3-201ENST00000535082 757 ntBASIC6.16□□□□□ -1.42
CCSER1Q9C0I3 AP005403.1-201ENST00000579720 229 ntBASIC6.16□□□□□ -1.42
CCSER1Q9C0I3 MIR4505-201ENST00000582238 73 ntBASIC6.16□□□□□ -1.42
CCSER1Q9C0I3 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
CCSER1Q9C0I3 RN7SL787P-201ENST00000613000 284 ntBASIC6.16□□□□□ -1.42
CCSER1Q9C0I3 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.16□□□□□ -1.42
CCSER1Q9C0I3 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
CCSER1Q9C0I3 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.16□□□□□ -1.42
CCSER1Q9C0I3 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.16□□□□□ -1.42
CCSER1Q9C0I3 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCSER1Q9C0I3 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCSER1Q9C0I3 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCSER1Q9C0I3 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.16□□□□□ -1.42
CCSER1Q9C0I3 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCSER1Q9C0I3 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCSER1Q9C0I3 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CCSER1Q9C0I3 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCSER1Q9C0I3 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.16□□□□□ -1.42
CCSER1Q9C0I3 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CCSER1Q9C0I3 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCSER1Q9C0I3 HCFC2P1-201ENST00000392864 1592 ntBASIC6.15□□□□□ -1.42
CCSER1Q9C0I3 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.15□□□□□ -1.42
CCSER1Q9C0I3 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
CCSER1Q9C0I3 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCSER1Q9C0I3 RN7SKP28-201ENST00000364770 305 ntBASIC6.15□□□□□ -1.42
CCSER1Q9C0I3 RNU4-2-201ENST00000365668 141 ntBASIC6.15□□□□□ -1.42
CCSER1Q9C0I3 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.15□□□□□ -1.42
CCSER1Q9C0I3 MIR323B-201ENST00000385269 82 ntBASIC6.15□□□□□ -1.42
CCSER1Q9C0I3 GPS2P1-201ENST00000411761 986 ntBASIC6.15□□□□□ -1.42
CCSER1Q9C0I3 DPPA2P2-201ENST00000418220 897 ntBASIC6.15□□□□□ -1.42
CCSER1Q9C0I3 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CCSER1Q9C0I3 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.15□□□□□ -1.42
CCSER1Q9C0I3 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.15□□□□□ -1.42
CCSER1Q9C0I3 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.15□□□□□ -1.42
CCSER1Q9C0I3 RPL36AP39-201ENST00000445859 318 ntBASIC6.15□□□□□ -1.42
CCSER1Q9C0I3 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.15□□□□□ -1.42
CCSER1Q9C0I3 TAAR4P-201ENST00000454843 1039 ntBASIC6.15□□□□□ -1.42
CCSER1Q9C0I3 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC6.15□□□□□ -1.42
CCSER1Q9C0I3 RN7SL717P-201ENST00000478343 297 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms