Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
AP1S3Q96PC3 STX3-208ENST00000641815 3236 ntBASIC4.14□□□□□ -1.75
AP1S3Q96PC3 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC4.14□□□□□ -1.75
AP1S3Q96PC3 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
AP1S3Q96PC3 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
AP1S3Q96PC3 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC4.13□□□□□ -1.75
AP1S3Q96PC3 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.13□□□□□ -1.75
AP1S3Q96PC3 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.13□□□□□ -1.75
AP1S3Q96PC3 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
AP1S3Q96PC3 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
AP1S3Q96PC3 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
AP1S3Q96PC3 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.13□□□□□ -1.75
AP1S3Q96PC3 AL513548.1-201ENST00000562904 1724 ntBASIC4.13□□□□□ -1.75
AP1S3Q96PC3 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
AP1S3Q96PC3 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
AP1S3Q96PC3 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
AP1S3Q96PC3 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
AP1S3Q96PC3 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
AP1S3Q96PC3 RNU4-44P-201ENST00000363050 141 ntBASIC4.13□□□□□ -1.75
AP1S3Q96PC3 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC4.13□□□□□ -1.75
AP1S3Q96PC3 RPL21P67-201ENST00000402896 478 ntBASIC4.13□□□□□ -1.75
AP1S3Q96PC3 AC012519.1-201ENST00000424588 610 ntBASIC4.13□□□□□ -1.75
AP1S3Q96PC3 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.13□□□□□ -1.75
AP1S3Q96PC3 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.13□□□□□ -1.75
AP1S3Q96PC3 AC007679.3-201ENST00000434035 414 ntBASIC4.13□□□□□ -1.75
AP1S3Q96PC3 TUBB4BP6-201ENST00000437576 479 ntBASIC4.13□□□□□ -1.75
AP1S3Q96PC3 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC4.13□□□□□ -1.75
AP1S3Q96PC3 PPIAP7-201ENST00000454070 489 ntBASIC4.13□□□□□ -1.75
AP1S3Q96PC3 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC4.13□□□□□ -1.75
AP1S3Q96PC3 AC122714.1-201ENST00000502510 459 ntBASIC4.13□□□□□ -1.75
AP1S3Q96PC3 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.13□□□□□ -1.75
AP1S3Q96PC3 BTG4P1-201ENST00000510421 183 ntBASIC4.13□□□□□ -1.75
AP1S3Q96PC3 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.13□□□□□ -1.75
AP1S3Q96PC3 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.13□□□□□ -1.75
AP1S3Q96PC3 AP000620.1-201ENST00000527147 504 ntBASIC4.13□□□□□ -1.75
AP1S3Q96PC3 SLC25A51P2-201ENST00000535708 889 ntBASIC4.13□□□□□ -1.75
AP1S3Q96PC3 AP002373.2-201ENST00000541631 1060 ntBASIC4.13□□□□□ -1.75
AP1S3Q96PC3 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.13□□□□□ -1.75
AP1S3Q96PC3 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC4.13□□□□□ -1.75
AP1S3Q96PC3 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC4.13□□□□□ -1.75
AP1S3Q96PC3 AC006349.1-201ENST00000555526 235 ntBASIC4.13□□□□□ -1.75
AP1S3Q96PC3 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC4.13□□□□□ -1.75
AP1S3Q96PC3 RN7SL435P-201ENST00000584418 282 ntBASIC4.13□□□□□ -1.75
AP1S3Q96PC3 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC4.13□□□□□ -1.75
AP1S3Q96PC3 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC4.13□□□□□ -1.75
AP1S3Q96PC3 AC012368.3-201ENST00000604190 219 ntBASIC4.13□□□□□ -1.75
AP1S3Q96PC3 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC4.13□□□□□ -1.75
AP1S3Q96PC3 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC4.13□□□□□ -1.75
AP1S3Q96PC3 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC4.13□□□□□ -1.75
AP1S3Q96PC3 AC091932.2-201ENST00000623014 291 ntBASIC4.13□□□□□ -1.75
AP1S3Q96PC3 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.13□□□□□ -1.75
AP1S3Q96PC3 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC4.13□□□□□ -1.75
AP1S3Q96PC3 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC4.13□□□□□ -1.75
AP1S3Q96PC3 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
AP1S3Q96PC3 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
AP1S3Q96PC3 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
AP1S3Q96PC3 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
AP1S3Q96PC3 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
AP1S3Q96PC3 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
AP1S3Q96PC3 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
AP1S3Q96PC3 HSPA8P18-201ENST00000439846 1928 ntBASIC4.13□□□□□ -1.75
AP1S3Q96PC3 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
AP1S3Q96PC3 AL034549.2-201ENST00000618285 3373 ntBASIC4.13□□□□□ -1.75
AP1S3Q96PC3 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
AP1S3Q96PC3 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
AP1S3Q96PC3 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
AP1S3Q96PC3 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
AP1S3Q96PC3 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
AP1S3Q96PC3 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
AP1S3Q96PC3 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
AP1S3Q96PC3 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.12□□□□□ -1.75
AP1S3Q96PC3 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.12□□□□□ -1.75
AP1S3Q96PC3 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
AP1S3Q96PC3 SNORD56.6-201ENST00000384569 71 ntBASIC4.12□□□□□ -1.75
AP1S3Q96PC3 AC005042.1-201ENST00000393397 800 ntBASIC4.12□□□□□ -1.75
AP1S3Q96PC3 MIR1271-201ENST00000408537 86 ntBASIC4.12□□□□□ -1.75
AP1S3Q96PC3 RN7SKP125-201ENST00000410481 302 ntBASIC4.12□□□□□ -1.75
AP1S3Q96PC3 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC4.12□□□□□ -1.75
AP1S3Q96PC3 AC092865.3-201ENST00000425390 1026 ntBASIC4.12□□□□□ -1.75
AP1S3Q96PC3 AC099782.1-201ENST00000425889 474 ntBASIC4.12□□□□□ -1.75
AP1S3Q96PC3 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
AP1S3Q96PC3 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC4.12□□□□□ -1.75
AP1S3Q96PC3 AC073465.2-201ENST00000440938 498 ntBASIC4.12□□□□□ -1.75
AP1S3Q96PC3 AC092601.1-201ENST00000444526 383 ntBASIC4.12□□□□□ -1.75
AP1S3Q96PC3 PPIAP32-201ENST00000449940 472 ntBASIC4.12□□□□□ -1.75
AP1S3Q96PC3 AC002553.2-201ENST00000453217 340 ntBASIC4.12□□□□□ -1.75
AP1S3Q96PC3 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.12□□□□□ -1.75
AP1S3Q96PC3 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC4.12□□□□□ -1.75
AP1S3Q96PC3 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC4.12□□□□□ -1.75
AP1S3Q96PC3 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC4.12□□□□□ -1.75
AP1S3Q96PC3 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
AP1S3Q96PC3 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC4.12□□□□□ -1.75
AP1S3Q96PC3 AC009879.1-201ENST00000520029 839 ntBASIC4.12□□□□□ -1.75
AP1S3Q96PC3 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.12□□□□□ -1.75
AP1S3Q96PC3 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.12□□□□□ -1.75
AP1S3Q96PC3 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC4.12□□□□□ -1.75
AP1S3Q96PC3 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC4.12□□□□□ -1.75
AP1S3Q96PC3 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.12□□□□□ -1.75
AP1S3Q96PC3 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
AP1S3Q96PC3 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms