Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AL606537.1-201ENST00000607258 2011 ntBASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 GAPDHP24-201ENST00000328713 983 ntBASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 SNORA64.1-201ENST00000362600 132 ntBASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 RNU6-249P-201ENST00000363016 102 ntBASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 RPS3AP2-201ENST00000407190 754 ntBASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 RIMKLBP2-201ENST00000424737 654 ntBASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 AC023271.1-201ENST00000445936 1090 ntBASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 ACA64.1-201ENST00000459171 127 ntBASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 RPL37P23-201ENST00000492641 294 ntBASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 DUTP7-201ENST00000507982 486 ntBASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 RNA5SP271-201ENST00000516700 88 ntBASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 SEC11B-201ENST00000518383 499 ntBASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 OR4A17P-201ENST00000526032 904 ntBASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 TOMM20P1-201ENST00000534518 427 ntBASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 AC068305.2-201ENST00000550567 1205 ntBASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 MIR4675-201ENST00000577898 77 ntBASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 H3F3BP2-201ENST00000583907 357 ntBASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 AC027279.1-201ENST00000568885 4284 ntBASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 TTC39DP-201ENST00000416781 1688 ntBASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 NPM1P18-201ENST00000434232 732 ntBASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 AP006222.1-205ENST00000450734 457 ntBASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 PSAT1P4-201ENST00000466500 526 ntBASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 AC011476.1-201ENST00000466725 307 ntBASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 RN7SL188P-201ENST00000469842 285 ntBASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 AC009237.13-201ENST00000603193 276 ntBASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 AC012213.4-201ENST00000606457 354 ntBASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 AL139124.1-201ENST00000609123 421 ntBASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 AC004241.3-201ENST00000611728 517 ntBASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 AC129915.3-201ENST00000634128 948 ntBASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 PWAR1-201ENST00000624188 2414 ntBASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.53□□□□□ -1.52
PDLIM5Q96HC4 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 AC125336.1-201ENST00000508893 2827 ntBASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 AC087565.3-202ENST00000642085 1603 ntBASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 AC092681.1-201ENST00000297369 291 ntBASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 RNU6-819P-201ENST00000364116 107 ntBASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms