Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VPS33AQ96AX1 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.54□□□□□ -1.52
VPS33AQ96AX1 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.54□□□□□ -1.52
VPS33AQ96AX1 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.54□□□□□ -1.52
VPS33AQ96AX1 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VPS33AQ96AX1 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.53□□□□□ -1.52
VPS33AQ96AX1 AC012254.3-201ENST00000591183 2117 ntBASIC5.53□□□□□ -1.52
VPS33AQ96AX1 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VPS33AQ96AX1 AL031595.2-201ENST00000624215 19071 ntBASIC5.53□□□□□ -1.52
VPS33AQ96AX1 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VPS33AQ96AX1 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
VPS33AQ96AX1 RNU1-136P-201ENST00000384181 164 ntBASIC5.53□□□□□ -1.52
VPS33AQ96AX1 GSTA12P-201ENST00000402398 508 ntBASIC5.53□□□□□ -1.52
VPS33AQ96AX1 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.53□□□□□ -1.52
VPS33AQ96AX1 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.53□□□□□ -1.52
VPS33AQ96AX1 RNGTTP1-201ENST00000420965 728 ntBASIC5.53□□□□□ -1.52
VPS33AQ96AX1 RPL7AP51-201ENST00000422016 760 ntBASIC5.53□□□□□ -1.52
VPS33AQ96AX1 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.53□□□□□ -1.52
VPS33AQ96AX1 FAM204CP-201ENST00000424489 642 ntBASIC5.53□□□□□ -1.52
VPS33AQ96AX1 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.53□□□□□ -1.52
VPS33AQ96AX1 RSL24D1P8-201ENST00000434442 492 ntBASIC5.53□□□□□ -1.52
VPS33AQ96AX1 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.53□□□□□ -1.52
VPS33AQ96AX1 PA2G4P6-201ENST00000438325 1197 ntBASIC5.53□□□□□ -1.52
VPS33AQ96AX1 AC064862.5-201ENST00000440618 334 ntBASIC5.53□□□□□ -1.52
VPS33AQ96AX1 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.53□□□□□ -1.52
VPS33AQ96AX1 RPL12P49-201ENST00000441100 121 ntBASIC5.53□□□□□ -1.52
VPS33AQ96AX1 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.53□□□□□ -1.52
VPS33AQ96AX1 MED28P3-201ENST00000444288 531 ntBASIC5.53□□□□□ -1.52
VPS33AQ96AX1 AC010240.2-201ENST00000445363 1205 ntBASIC5.53□□□□□ -1.52
VPS33AQ96AX1 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.53□□□□□ -1.52
VPS33AQ96AX1 GAPDHP14-201ENST00000450472 937 ntBASIC5.53□□□□□ -1.52
VPS33AQ96AX1 MTND2P3-201ENST00000452458 470 ntBASIC5.53□□□□□ -1.52
VPS33AQ96AX1 PPIAP7-201ENST00000454070 489 ntBASIC5.53□□□□□ -1.52
VPS33AQ96AX1 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.53□□□□□ -1.52
VPS33AQ96AX1 AP002345.1-201ENST00000456493 928 ntBASIC5.53□□□□□ -1.52
VPS33AQ96AX1 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.53□□□□□ -1.52
VPS33AQ96AX1 AP002453.1-201ENST00000492327 668 ntBASIC5.53□□□□□ -1.52
VPS33AQ96AX1 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.53□□□□□ -1.52
VPS33AQ96AX1 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC5.53□□□□□ -1.52
VPS33AQ96AX1 AC105384.2-201ENST00000508433 640 ntBASIC5.53□□□□□ -1.52
VPS33AQ96AX1 HMGB1P47-201ENST00000511281 589 ntBASIC5.53□□□□□ -1.52
VPS33AQ96AX1 RNU2-45P-201ENST00000516068 187 ntBASIC5.53□□□□□ -1.52
VPS33AQ96AX1 AP000620.1-201ENST00000527147 504 ntBASIC5.53□□□□□ -1.52
VPS33AQ96AX1 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
VPS33AQ96AX1 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.53□□□□□ -1.52
VPS33AQ96AX1 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.53□□□□□ -1.52
VPS33AQ96AX1 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.53□□□□□ -1.52
VPS33AQ96AX1 AC007346.1-201ENST00000569208 867 ntBASIC5.53□□□□□ -1.52
VPS33AQ96AX1 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.53□□□□□ -1.52
VPS33AQ96AX1 AC084373.1-201ENST00000603311 235 ntBASIC5.53□□□□□ -1.52
VPS33AQ96AX1 AC015802.5-201ENST00000607478 399 ntBASIC5.53□□□□□ -1.52
VPS33AQ96AX1 AC092681.3-201ENST00000609463 678 ntBASIC5.53□□□□□ -1.52
VPS33AQ96AX1 AL356274.1-201ENST00000617064 410 ntBASIC5.53□□□□□ -1.52
VPS33AQ96AX1 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
VPS33AQ96AX1 AL035661.1-201ENST00000620459 1144 ntBASIC5.53□□□□□ -1.52
VPS33AQ96AX1 AC005899.6-201ENST00000620729 297 ntBASIC5.53□□□□□ -1.52
VPS33AQ96AX1 AL118508.4-201ENST00000624142 1176 ntBASIC5.53□□□□□ -1.52
VPS33AQ96AX1 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.53□□□□□ -1.52
VPS33AQ96AX1 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.53□□□□□ -1.52
VPS33AQ96AX1 AC073488.6-201ENST00000632293 754 ntBASIC5.53□□□□□ -1.52
VPS33AQ96AX1 RBPJP7-201ENST00000442803 1447 ntBASIC5.53□□□□□ -1.52
VPS33AQ96AX1 RBPJP5-201ENST00000449433 1447 ntBASIC5.53□□□□□ -1.52
VPS33AQ96AX1 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VPS33AQ96AX1 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
VPS33AQ96AX1 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VPS33AQ96AX1 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VPS33AQ96AX1 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VPS33AQ96AX1 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.53□□□□□ -1.52
VPS33AQ96AX1 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VPS33AQ96AX1 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.53□□□□□ -1.52
VPS33AQ96AX1 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VPS33AQ96AX1 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS33AQ96AX1 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VPS33AQ96AX1 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VPS33AQ96AX1 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VPS33AQ96AX1 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS33AQ96AX1 AC144833.1-201ENST00000567953 4089 ntBASIC5.52□□□□□ -1.53
VPS33AQ96AX1 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS33AQ96AX1 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS33AQ96AX1 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
VPS33AQ96AX1 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
VPS33AQ96AX1 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
VPS33AQ96AX1 SNORA27.3-201ENST00000364937 134 ntBASIC5.52□□□□□ -1.53
VPS33AQ96AX1 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS33AQ96AX1 AL136131.1-201ENST00000406079 803 ntBASIC5.52□□□□□ -1.53
VPS33AQ96AX1 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS33AQ96AX1 OR51A6P-201ENST00000418680 1004 ntBASIC5.52□□□□□ -1.53
VPS33AQ96AX1 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS33AQ96AX1 AC092865.3-201ENST00000425390 1026 ntBASIC5.52□□□□□ -1.53
VPS33AQ96AX1 VN1R21P-201ENST00000426703 765 ntBASIC5.52□□□□□ -1.53
VPS33AQ96AX1 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS33AQ96AX1 AL353662.1-201ENST00000439099 327 ntBASIC5.52□□□□□ -1.53
VPS33AQ96AX1 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS33AQ96AX1 BMS1P10-201ENST00000443754 1120 ntBASIC5.52□□□□□ -1.53
VPS33AQ96AX1 AL513343.1-201ENST00000451818 792 ntBASIC5.52□□□□□ -1.53
VPS33AQ96AX1 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS33AQ96AX1 AC004890.1-201ENST00000461005 181 ntBASIC5.52□□□□□ -1.53
VPS33AQ96AX1 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS33AQ96AX1 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VPS33AQ96AX1 AC106822.1-201ENST00000502647 526 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 174.4 ms