Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AL359265.1-201ENST00000440296 795 ntBASIC4.29□□□□□ -1.72
HIST1H1AQ02539 LINC02210-201ENST00000444561 288 ntBASIC4.29□□□□□ -1.72
HIST1H1AQ02539 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 AL589765.3-201ENST00000446084 462 ntBASIC4.29□□□□□ -1.72
HIST1H1AQ02539 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 PPIAP27-201ENST00000453800 265 ntBASIC4.29□□□□□ -1.72
HIST1H1AQ02539 AC118758.1-202ENST00000454719 225 ntBASIC4.29□□□□□ -1.72
HIST1H1AQ02539 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 AC104339.1-201ENST00000465478 348 ntBASIC4.29□□□□□ -1.72
HIST1H1AQ02539 AL122020.1-201ENST00000472287 459 ntBASIC4.29□□□□□ -1.72
HIST1H1AQ02539 RPS7P6-201ENST00000485777 579 ntBASIC4.29□□□□□ -1.72
HIST1H1AQ02539 LDHAP1-201ENST00000509421 992 ntBASIC4.29□□□□□ -1.72
HIST1H1AQ02539 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 HSD3BP3-201ENST00000514706 994 ntBASIC4.29□□□□□ -1.72
HIST1H1AQ02539 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 IGKV3D-25-201ENST00000519599 235 ntBASIC4.29□□□□□ -1.72
HIST1H1AQ02539 CETN3-206ENST00000522864 738 ntTSL 3 BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 PCNAP4-201ENST00000532690 730 ntBASIC4.29□□□□□ -1.72
HIST1H1AQ02539 AC084121.1-201ENST00000533882 835 ntBASIC4.29□□□□□ -1.72
HIST1H1AQ02539 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 OR1E3-201ENST00000575608 948 ntBASIC4.29□□□□□ -1.72
HIST1H1AQ02539 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 MIR5010-201ENST00000582846 120 ntBASIC4.29□□□□□ -1.72
HIST1H1AQ02539 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 TEX41-218ENST00000596540 882 ntTSL 5 BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 MIR6809-201ENST00000612189 116 ntBASIC4.29□□□□□ -1.72
HIST1H1AQ02539 MIR6793-201ENST00000612376 63 ntBASIC4.29□□□□□ -1.72
HIST1H1AQ02539 AC090607.5-201ENST00000615692 224 ntBASIC4.29□□□□□ -1.72
HIST1H1AQ02539 AL035661.1-201ENST00000620459 1144 ntBASIC4.29□□□□□ -1.72
HIST1H1AQ02539 MIR6806-201ENST00000622141 64 ntBASIC4.29□□□□□ -1.72
HIST1H1AQ02539 AP001642.1-201ENST00000624727 2117 ntBASIC4.29□□□□□ -1.72
HIST1H1AQ02539 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 AC007938.2-201ENST00000604666 2634 ntBASIC4.29□□□□□ -1.72
HIST1H1AQ02539 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.28□□□□□ -1.72
HIST1H1AQ02539 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HIST1H1AQ02539 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HIST1H1AQ02539 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HIST1H1AQ02539 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.28□□□□□ -1.72
HIST1H1AQ02539 OR4F13P-202ENST00000560066 2054 ntBASIC4.28□□□□□ -1.72
HIST1H1AQ02539 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HIST1H1AQ02539 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.28□□□□□ -1.72
HIST1H1AQ02539 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.28□□□□□ -1.72
HIST1H1AQ02539 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HIST1H1AQ02539 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HIST1H1AQ02539 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HIST1H1AQ02539 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
HIST1H1AQ02539 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.28□□□□□ -1.72
HIST1H1AQ02539 VDAC2P1-201ENST00000399358 958 ntBASIC4.28□□□□□ -1.72
HIST1H1AQ02539 RNA5SP487-201ENST00000410186 122 ntBASIC4.28□□□□□ -1.72
HIST1H1AQ02539 AC096921.1-201ENST00000411661 375 ntBASIC4.28□□□□□ -1.72
HIST1H1AQ02539 AL357752.1-201ENST00000412817 349 ntBASIC4.28□□□□□ -1.72
HIST1H1AQ02539 AL354890.1-201ENST00000413730 346 ntBASIC4.28□□□□□ -1.72
HIST1H1AQ02539 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC4.28□□□□□ -1.72
HIST1H1AQ02539 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC4.28□□□□□ -1.72
HIST1H1AQ02539 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC4.28□□□□□ -1.72
HIST1H1AQ02539 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC4.28□□□□□ -1.72
HIST1H1AQ02539 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.28□□□□□ -1.72
HIST1H1AQ02539 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC4.28□□□□□ -1.72
HIST1H1AQ02539 RNA5SP103-201ENST00000459503 118 ntBASIC4.28□□□□□ -1.72
HIST1H1AQ02539 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC4.28□□□□□ -1.72
HIST1H1AQ02539 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HIST1H1AQ02539 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC4.28□□□□□ -1.72
HIST1H1AQ02539 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.28□□□□□ -1.72
HIST1H1AQ02539 RBBP4P1-201ENST00000502424 1276 ntBASIC4.28□□□□□ -1.72
HIST1H1AQ02539 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.28□□□□□ -1.72
HIST1H1AQ02539 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC4.28□□□□□ -1.72
HIST1H1AQ02539 RNA5SP340-201ENST00000517132 107 ntBASIC4.28□□□□□ -1.72
HIST1H1AQ02539 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.28□□□□□ -1.72
HIST1H1AQ02539 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.28□□□□□ -1.72
HIST1H1AQ02539 AC137627.1-201ENST00000545761 289 ntBASIC4.28□□□□□ -1.72
HIST1H1AQ02539 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC4.28□□□□□ -1.72
HIST1H1AQ02539 AC006530.1-201ENST00000555980 571 ntBASIC4.28□□□□□ -1.72
HIST1H1AQ02539 AC091078.2-201ENST00000557145 559 ntBASIC4.28□□□□□ -1.72
HIST1H1AQ02539 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC4.28□□□□□ -1.72
HIST1H1AQ02539 NMNAT1P5-201ENST00000559657 841 ntBASIC4.28□□□□□ -1.72
HIST1H1AQ02539 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC4.28□□□□□ -1.72
HIST1H1AQ02539 AC127024.5-201ENST00000580085 462 ntBASIC4.28□□□□□ -1.72
HIST1H1AQ02539 MIR7853-201ENST00000584820 132 ntBASIC4.28□□□□□ -1.72
HIST1H1AQ02539 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC4.28□□□□□ -1.72
HIST1H1AQ02539 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.28□□□□□ -1.72
HIST1H1AQ02539 AP001437.1-201ENST00000608783 456 ntBASIC4.28□□□□□ -1.72
HIST1H1AQ02539 AL139124.1-201ENST00000609123 421 ntBASIC4.28□□□□□ -1.72
HIST1H1AQ02539 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC4.28□□□□□ -1.72
HIST1H1AQ02539 AC048341.3-201ENST00000619323 491 ntBASIC4.28□□□□□ -1.72
HIST1H1AQ02539 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC4.28□□□□□ -1.72
HIST1H1AQ02539 AL683826.1-201ENST00000624104 627 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms