Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 PWAR1-201ENST00000624188 2414 ntBASIC5.58□□□□□ -1.52
CDK3Q00526 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.58□□□□□ -1.52
CDK3Q00526 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDK3Q00526 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.58□□□□□ -1.52
CDK3Q00526 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.58□□□□□ -1.52
CDK3Q00526 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDK3Q00526 LINC01963-201ENST00000562038 3148 ntBASIC5.57□□□□□ -1.52
CDK3Q00526 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDK3Q00526 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.57□□□□□ -1.52
CDK3Q00526 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDK3Q00526 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CDK3Q00526 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CDK3Q00526 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDK3Q00526 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDK3Q00526 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDK3Q00526 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
CDK3Q00526 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.57□□□□□ -1.52
CDK3Q00526 NACAP7-201ENST00000407371 609 ntBASIC5.57□□□□□ -1.52
CDK3Q00526 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.57□□□□□ -1.52
CDK3Q00526 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.57□□□□□ -1.52
CDK3Q00526 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.57□□□□□ -1.52
CDK3Q00526 AC106901.1-201ENST00000425086 698 ntBASIC5.57□□□□□ -1.52
CDK3Q00526 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.57□□□□□ -1.52
CDK3Q00526 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.57□□□□□ -1.52
CDK3Q00526 AC012075.1-201ENST00000436549 580 ntBASIC5.57□□□□□ -1.52
CDK3Q00526 AL390119.1-201ENST00000440329 312 ntBASIC5.57□□□□□ -1.52
CDK3Q00526 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.57□□□□□ -1.52
CDK3Q00526 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.57□□□□□ -1.52
CDK3Q00526 VDAC2P4-201ENST00000452925 711 ntBASIC5.57□□□□□ -1.52
CDK3Q00526 TAAR4P-201ENST00000454843 1039 ntBASIC5.57□□□□□ -1.52
CDK3Q00526 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDK3Q00526 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDK3Q00526 ATP5LP3-201ENST00000514223 304 ntBASIC5.57□□□□□ -1.52
CDK3Q00526 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.57□□□□□ -1.52
CDK3Q00526 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.57□□□□□ -1.52
CDK3Q00526 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CDK3Q00526 NPM1P42-201ENST00000560329 862 ntBASIC5.57□□□□□ -1.52
CDK3Q00526 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.57□□□□□ -1.52
CDK3Q00526 AC027281.1-201ENST00000574178 758 ntBASIC5.57□□□□□ -1.52
CDK3Q00526 MIR4311-201ENST00000580794 100 ntBASIC5.57□□□□□ -1.52
CDK3Q00526 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC5.57□□□□□ -1.52
CDK3Q00526 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.57□□□□□ -1.52
CDK3Q00526 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.57□□□□□ -1.52
CDK3Q00526 AC007620.3-201ENST00000608131 497 ntBASIC5.57□□□□□ -1.52
CDK3Q00526 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.57□□□□□ -1.52
CDK3Q00526 AC022467.1-201ENST00000614738 749 ntBASIC5.57□□□□□ -1.52
CDK3Q00526 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDK3Q00526 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.57□□□□□ -1.52
CDK3Q00526 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CDK3Q00526 AC004808.2-201ENST00000627965 773 ntBASIC5.57□□□□□ -1.52
CDK3Q00526 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.57□□□□□ -1.52
CDK3Q00526 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDK3Q00526 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDK3Q00526 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDK3Q00526 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.57□□□□□ -1.52
CDK3Q00526 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.57□□□□□ -1.52
CDK3Q00526 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDK3Q00526 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CDK3Q00526 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.56□□□□□ -1.52
CDK3Q00526 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.56□□□□□ -1.52
CDK3Q00526 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDK3Q00526 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.56□□□□□ -1.52
CDK3Q00526 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDK3Q00526 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.56□□□□□ -1.52
CDK3Q00526 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDK3Q00526 AL353625.1-202ENST00000366273 571 ntBASIC5.56□□□□□ -1.52
CDK3Q00526 RN7SKP279-201ENST00000411383 298 ntBASIC5.56□□□□□ -1.52
CDK3Q00526 RNGTTP1-201ENST00000420965 728 ntBASIC5.56□□□□□ -1.52
CDK3Q00526 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.56□□□□□ -1.52
CDK3Q00526 AC092651.1-201ENST00000426110 312 ntBASIC5.56□□□□□ -1.52
CDK3Q00526 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.56□□□□□ -1.52
CDK3Q00526 LDHAP2-201ENST00000437325 985 ntBASIC5.56□□□□□ -1.52
CDK3Q00526 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.56□□□□□ -1.52
CDK3Q00526 AL606490.8-201ENST00000441624 319 ntBASIC5.56□□□□□ -1.52
CDK3Q00526 CYCSP51-201ENST00000443545 318 ntBASIC5.56□□□□□ -1.52
CDK3Q00526 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.56□□□□□ -1.52
CDK3Q00526 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.56□□□□□ -1.52
CDK3Q00526 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDK3Q00526 RN7SL284P-201ENST00000498823 275 ntBASIC5.56□□□□□ -1.52
CDK3Q00526 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.56□□□□□ -1.52
CDK3Q00526 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.56□□□□□ -1.52
CDK3Q00526 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.56□□□□□ -1.52
CDK3Q00526 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.56□□□□□ -1.52
CDK3Q00526 OR4A6P-201ENST00000534364 970 ntBASIC5.56□□□□□ -1.52
CDK3Q00526 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.56□□□□□ -1.52
CDK3Q00526 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.56□□□□□ -1.52
CDK3Q00526 DHFRP1-201ENST00000579682 559 ntBASIC5.56□□□□□ -1.52
CDK3Q00526 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.56□□□□□ -1.52
CDK3Q00526 AP000894.4-201ENST00000610185 483 ntBASIC5.56□□□□□ -1.52
CDK3Q00526 AL352984.2-202ENST00000613699 155 ntBASIC5.56□□□□□ -1.52
CDK3Q00526 AC104307.1-201ENST00000616142 196 ntBASIC5.56□□□□□ -1.52
CDK3Q00526 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.56□□□□□ -1.52
CDK3Q00526 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDK3Q00526 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.56□□□□□ -1.52
CDK3Q00526 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDK3Q00526 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDK3Q00526 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDK3Q00526 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.56□□□□□ -1.52
CDK3Q00526 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CDK3Q00526 OFD1P17-201ENST00000437639 3018 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms