Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
TNFSF4P23510 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TNFSF4P23510 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TNFSF4P23510 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TNFSF4P23510 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
TNFSF4P23510 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.59□□□□□ -1.52
TNFSF4P23510 AP001284.1-201ENST00000528393 2118 ntBASIC5.59□□□□□ -1.52
TNFSF4P23510 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.59□□□□□ -1.52
TNFSF4P23510 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
TNFSF4P23510 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TNFSF4P23510 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
TNFSF4P23510 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TNFSF4P23510 AL591848.4-201ENST00000567832 3472 ntBASIC5.58□□□□□ -1.52
TNFSF4P23510 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
TNFSF4P23510 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC5.58□□□□□ -1.52
TNFSF4P23510 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.58□□□□□ -1.52
TNFSF4P23510 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TNFSF4P23510 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TNFSF4P23510 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
TNFSF4P23510 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
TNFSF4P23510 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.58□□□□□ -1.52
TNFSF4P23510 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TNFSF4P23510 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TNFSF4P23510 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TNFSF4P23510 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.58□□□□□ -1.52
TNFSF4P23510 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TNFSF4P23510 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TNFSF4P23510 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
TNFSF4P23510 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TNFSF4P23510 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TNFSF4P23510 RNU6-353P-201ENST00000364266 108 ntBASIC5.58□□□□□ -1.52
TNFSF4P23510 RNA5SP485-201ENST00000365053 119 ntBASIC5.58□□□□□ -1.52
TNFSF4P23510 U3.52-201ENST00000384034 216 ntBASIC5.58□□□□□ -1.52
TNFSF4P23510 Y_RNA.578-201ENST00000390903 88 ntBASIC5.58□□□□□ -1.52
TNFSF4P23510 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TNFSF4P23510 MCTS2P-201ENST00000394552 546 ntBASIC5.58□□□□□ -1.52
TNFSF4P23510 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
TNFSF4P23510 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.58□□□□□ -1.52
TNFSF4P23510 RPS7P9-201ENST00000414704 586 ntBASIC5.58□□□□□ -1.52
TNFSF4P23510 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TNFSF4P23510 Z82198.3-201ENST00000421145 199 ntBASIC5.58□□□□□ -1.52
TNFSF4P23510 AL139415.1-201ENST00000424862 352 ntBASIC5.58□□□□□ -1.52
TNFSF4P23510 MTND2P5-201ENST00000432656 1006 ntBASIC5.58□□□□□ -1.52
TNFSF4P23510 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC5.58□□□□□ -1.52
TNFSF4P23510 AL035246.1-201ENST00000433554 1255 ntBASIC5.58□□□□□ -1.52
TNFSF4P23510 USP9YP24-201ENST00000434374 697 ntBASIC5.58□□□□□ -1.52
TNFSF4P23510 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.58□□□□□ -1.52
TNFSF4P23510 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TNFSF4P23510 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.58□□□□□ -1.52
TNFSF4P23510 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.58□□□□□ -1.52
TNFSF4P23510 AC245291.3-201ENST00000443400 292 ntBASIC5.58□□□□□ -1.52
TNFSF4P23510 USP9YP17-201ENST00000444617 696 ntBASIC5.58□□□□□ -1.52
TNFSF4P23510 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC5.58□□□□□ -1.52
TNFSF4P23510 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC5.58□□□□□ -1.52
TNFSF4P23510 AL929288.2-201ENST00000446368 407 ntBASIC5.58□□□□□ -1.52
TNFSF4P23510 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.58□□□□□ -1.52
TNFSF4P23510 OR2AF1P-201ENST00000454899 889 ntBASIC5.58□□□□□ -1.52
TNFSF4P23510 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TNFSF4P23510 RNU6-1218P-201ENST00000458990 108 ntBASIC5.58□□□□□ -1.52
TNFSF4P23510 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.58□□□□□ -1.52
TNFSF4P23510 AC091965.3-201ENST00000506236 208 ntBASIC5.58□□□□□ -1.52
TNFSF4P23510 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.58□□□□□ -1.52
TNFSF4P23510 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.58□□□□□ -1.52
TNFSF4P23510 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.58□□□□□ -1.52
TNFSF4P23510 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC5.58□□□□□ -1.52
TNFSF4P23510 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.58□□□□□ -1.52
TNFSF4P23510 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
TNFSF4P23510 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
TNFSF4P23510 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
TNFSF4P23510 AL356801.1-201ENST00000559320 294 ntBASIC5.58□□□□□ -1.52
TNFSF4P23510 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC5.58□□□□□ -1.52
TNFSF4P23510 AC090312.2-201ENST00000582687 378 ntBASIC5.58□□□□□ -1.52
TNFSF4P23510 RPL29P33-201ENST00000587474 316 ntBASIC5.58□□□□□ -1.52
TNFSF4P23510 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.58□□□□□ -1.52
TNFSF4P23510 BNIP3P4-201ENST00000604946 565 ntBASIC5.58□□□□□ -1.52
TNFSF4P23510 SNORD96A-201ENST00000606577 79 ntBASIC5.58□□□□□ -1.52
TNFSF4P23510 RNU4-5P-201ENST00000607255 135 ntBASIC5.58□□□□□ -1.52
TNFSF4P23510 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TNFSF4P23510 CNTNAP3P1-201ENST00000616657 906 ntBASIC5.58□□□□□ -1.52
TNFSF4P23510 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
TNFSF4P23510 AC008147.4-201ENST00000617570 1204 ntBASIC5.58□□□□□ -1.52
TNFSF4P23510 MIR6085-201ENST00000618314 110 ntBASIC5.58□□□□□ -1.52
TNFSF4P23510 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TNFSF4P23510 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TNFSF4P23510 AC004232.3-201ENST00000622977 525 ntBASIC5.58□□□□□ -1.52
TNFSF4P23510 AC109454.4-201ENST00000623411 649 ntBASIC5.58□□□□□ -1.52
TNFSF4P23510 AC018692.2-201ENST00000624130 348 ntBASIC5.58□□□□□ -1.52
TNFSF4P23510 RACK1-235ENST00000626067 564 ntTSL 2 BASIC5.58□□□□□ -1.52
TNFSF4P23510 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.58□□□□□ -1.52
TNFSF4P23510 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.58□□□□□ -1.52
TNFSF4P23510 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.58□□□□□ -1.52
TNFSF4P23510 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC5.58□□□□□ -1.52
TNFSF4P23510 AC017104.5-201ENST00000637647 639 ntBASIC5.58□□□□□ -1.52
TNFSF4P23510 AC009452.1-201ENST00000640823 606 ntBASIC5.58□□□□□ -1.52
TNFSF4P23510 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.58□□□□□ -1.52
TNFSF4P23510 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
TNFSF4P23510 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TNFSF4P23510 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
TNFSF4P23510 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TNFSF4P23510 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms