Protein–RNA interactions for Protein: P20585

MSH3, DNA mismatch repair protein Msh3, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3P20585 RPS6P23-201ENST00000413224 722 ntBASIC5.63□□□□□ -1.51
MSH3P20585 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.63□□□□□ -1.51
MSH3P20585 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
MSH3P20585 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
MSH3P20585 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.63□□□□□ -1.51
MSH3P20585 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.63□□□□□ -1.51
MSH3P20585 AC242426.1-201ENST00000435270 960 ntBASIC5.63□□□□□ -1.51
MSH3P20585 NPM1P48-201ENST00000436002 853 ntBASIC5.63□□□□□ -1.51
MSH3P20585 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.63□□□□□ -1.51
MSH3P20585 RPL36AP39-201ENST00000445859 318 ntBASIC5.63□□□□□ -1.51
MSH3P20585 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.63□□□□□ -1.51
MSH3P20585 MTND2P3-201ENST00000452458 470 ntBASIC5.63□□□□□ -1.51
MSH3P20585 TAAR4P-201ENST00000454843 1039 ntBASIC5.63□□□□□ -1.51
MSH3P20585 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.63□□□□□ -1.51
MSH3P20585 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.63□□□□□ -1.51
MSH3P20585 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
MSH3P20585 RPS7P6-201ENST00000485777 579 ntBASIC5.63□□□□□ -1.51
MSH3P20585 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.63□□□□□ -1.51
MSH3P20585 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.63□□□□□ -1.51
MSH3P20585 SNORA43.3-201ENST00000517240 103 ntBASIC5.63□□□□□ -1.51
MSH3P20585 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.63□□□□□ -1.51
MSH3P20585 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC5.63□□□□□ -1.51
MSH3P20585 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.63□□□□□ -1.51
MSH3P20585 AC063977.5-201ENST00000601044 974 ntBASIC5.63□□□□□ -1.51
MSH3P20585 AC005229.3-201ENST00000603438 323 ntBASIC5.63□□□□□ -1.51
MSH3P20585 BX322635.1-201ENST00000605804 496 ntBASIC5.63□□□□□ -1.51
MSH3P20585 AC007620.3-201ENST00000608131 497 ntBASIC5.63□□□□□ -1.51
MSH3P20585 AC006213.4-201ENST00000616184 634 ntBASIC5.63□□□□□ -1.51
MSH3P20585 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.63□□□□□ -1.51
MSH3P20585 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
MSH3P20585 MTCO1P1-201ENST00000624263 1081 ntBASIC5.63□□□□□ -1.51
MSH3P20585 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.63□□□□□ -1.51
MSH3P20585 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.63□□□□□ -1.51
MSH3P20585 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.63□□□□□ -1.51
MSH3P20585 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
MSH3P20585 MTCO1P22-201ENST00000604619 1360 ntBASIC5.63□□□□□ -1.51
MSH3P20585 AC011933.2-201ENST00000578539 2790 ntBASIC5.63□□□□□ -1.51
MSH3P20585 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.63□□□□□ -1.51
MSH3P20585 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
MSH3P20585 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
MSH3P20585 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
MSH3P20585 AL022311.1-201ENST00000623726 19416 ntBASIC5.62□□□□□ -1.51
MSH3P20585 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
MSH3P20585 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
MSH3P20585 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
MSH3P20585 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
MSH3P20585 OR13C1P-202ENST00000641378 2919 ntBASIC5.62□□□□□ -1.51
MSH3P20585 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
MSH3P20585 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
MSH3P20585 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.62□□□□□ -1.51
MSH3P20585 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.62□□□□□ -1.51
MSH3P20585 MIR133A2-201ENST00000347538 102 ntBASIC5.62□□□□□ -1.51
MSH3P20585 RN7SKP292-201ENST00000365522 317 ntBASIC5.62□□□□□ -1.51
MSH3P20585 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.62□□□□□ -1.51
MSH3P20585 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.62□□□□□ -1.51
MSH3P20585 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.62□□□□□ -1.51
MSH3P20585 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.62□□□□□ -1.51
MSH3P20585 AC009506.2-201ENST00000420635 840 ntBASIC5.62□□□□□ -1.51
MSH3P20585 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.62□□□□□ -1.51
MSH3P20585 OR10T1P-201ENST00000424327 947 ntBASIC5.62□□□□□ -1.51
MSH3P20585 MTND6P12-201ENST00000428247 522 ntBASIC5.62□□□□□ -1.51
MSH3P20585 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.62□□□□□ -1.51
MSH3P20585 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.62□□□□□ -1.51
MSH3P20585 AL049829.1-201ENST00000465411 156 ntBASIC5.62□□□□□ -1.51
MSH3P20585 RPL12P24-201ENST00000474907 486 ntBASIC5.62□□□□□ -1.51
MSH3P20585 RPS3AP15-201ENST00000483874 781 ntBASIC5.62□□□□□ -1.51
MSH3P20585 RPS26P24-201ENST00000497656 331 ntBASIC5.62□□□□□ -1.51
MSH3P20585 AC112184.1-201ENST00000505179 312 ntBASIC5.62□□□□□ -1.51
MSH3P20585 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.62□□□□□ -1.51
MSH3P20585 UGT2A3P7-201ENST00000510485 734 ntBASIC5.62□□□□□ -1.51
MSH3P20585 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.62□□□□□ -1.51
MSH3P20585 MRPS16P1-201ENST00000523462 412 ntBASIC5.62□□□□□ -1.51
MSH3P20585 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.62□□□□□ -1.51
MSH3P20585 AC135626.1-201ENST00000556983 435 ntBASIC5.62□□□□□ -1.51
MSH3P20585 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.62□□□□□ -1.51
MSH3P20585 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.62□□□□□ -1.51
MSH3P20585 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.62□□□□□ -1.51
MSH3P20585 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.62□□□□□ -1.51
MSH3P20585 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.62□□□□□ -1.51
MSH3P20585 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.62□□□□□ -1.51
MSH3P20585 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.62□□□□□ -1.51
MSH3P20585 AC104820.1-201ENST00000624183 307 ntBASIC5.62□□□□□ -1.51
MSH3P20585 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.62□□□□□ -1.51
MSH3P20585 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.62□□□□□ -1.51
MSH3P20585 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
MSH3P20585 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.62□□□□□ -1.51
MSH3P20585 AC005261.6-201ENST00000623072 1387 ntBASIC5.62□□□□□ -1.51
MSH3P20585 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
MSH3P20585 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
MSH3P20585 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.62□□□□□ -1.51
MSH3P20585 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
MSH3P20585 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
MSH3P20585 AC007842.1-201ENST00000597336 2039 ntBASIC5.62□□□□□ -1.51
MSH3P20585 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
MSH3P20585 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
MSH3P20585 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.61□□□□□ -1.51
MSH3P20585 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.61□□□□□ -1.51
MSH3P20585 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
MSH3P20585 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.61□□□□□ -1.51
MSH3P20585 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms