Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 AC069542.2-201ENST00000624816 216 ntBASIC5.11□□□□□ -1.59
LMX1BO60663 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.11□□□□□ -1.59
LMX1BO60663 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LMX1BO60663 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.11□□□□□ -1.59
LMX1BO60663 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
LMX1BO60663 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
LMX1BO60663 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC5.11□□□□□ -1.59
LMX1BO60663 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
LMX1BO60663 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
LMX1BO60663 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LMX1BO60663 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LMX1BO60663 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LMX1BO60663 AC123769.1-201ENST00000530992 3192 ntBASIC5.11□□□□□ -1.59
LMX1BO60663 AC140134.1-201ENST00000511830 3544 ntBASIC5.11□□□□□ -1.59
LMX1BO60663 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LMX1BO60663 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LMX1BO60663 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LMX1BO60663 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LMX1BO60663 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LMX1BO60663 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LMX1BO60663 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.11□□□□□ -1.59
LMX1BO60663 MFSD8-239ENST00000641590 2479 ntBASIC5.11□□□□□ -1.59
LMX1BO60663 MFSD8-219ENST00000641228 2559 ntBASIC5.1□□□□□ -1.59
LMX1BO60663 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LMX1BO60663 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LMX1BO60663 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
LMX1BO60663 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
LMX1BO60663 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.1□□□□□ -1.59
LMX1BO60663 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
LMX1BO60663 AP002512.4-202ENST00000641599 4530 ntBASIC5.1□□□□□ -1.59
LMX1BO60663 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.1□□□□□ -1.59
LMX1BO60663 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
LMX1BO60663 RN7SKP292-201ENST00000365522 317 ntBASIC5.1□□□□□ -1.59
LMX1BO60663 RPL7P58-201ENST00000402913 758 ntBASIC5.1□□□□□ -1.59
LMX1BO60663 AL513325.1-201ENST00000417716 1034 ntBASIC5.1□□□□□ -1.59
LMX1BO60663 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.1□□□□□ -1.59
LMX1BO60663 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.1□□□□□ -1.59
LMX1BO60663 MTCO2P17-201ENST00000424336 677 ntBASIC5.1□□□□□ -1.59
LMX1BO60663 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.1□□□□□ -1.59
LMX1BO60663 MTND4LP7-201ENST00000431728 294 ntBASIC5.1□□□□□ -1.59
LMX1BO60663 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.1□□□□□ -1.59
LMX1BO60663 LDHAP2-201ENST00000437325 985 ntBASIC5.1□□□□□ -1.59
LMX1BO60663 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC5.1□□□□□ -1.59
LMX1BO60663 RNF2P1-201ENST00000442955 1010 ntBASIC5.1□□□□□ -1.59
LMX1BO60663 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.1□□□□□ -1.59
LMX1BO60663 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LMX1BO60663 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.1□□□□□ -1.59
LMX1BO60663 YWHAEP1-201ENST00000453697 763 ntBASIC5.1□□□□□ -1.59
LMX1BO60663 RPSAP39-201ENST00000467439 883 ntBASIC5.1□□□□□ -1.59
LMX1BO60663 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.1□□□□□ -1.59
LMX1BO60663 AC079080.1-201ENST00000479841 822 ntBASIC5.1□□□□□ -1.59
LMX1BO60663 AC006539.1-201ENST00000481419 501 ntBASIC5.1□□□□□ -1.59
LMX1BO60663 AC092902.1-201ENST00000486999 259 ntBASIC5.1□□□□□ -1.59
LMX1BO60663 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.1□□□□□ -1.59
LMX1BO60663 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.1□□□□□ -1.59
LMX1BO60663 AC114322.1-201ENST00000506771 926 ntBASIC5.1□□□□□ -1.59
LMX1BO60663 AC002456.2-201ENST00000509356 380 ntBASIC5.1□□□□□ -1.59
LMX1BO60663 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.1□□□□□ -1.59
LMX1BO60663 SETP21-201ENST00000514799 892 ntBASIC5.1□□□□□ -1.59
LMX1BO60663 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.1□□□□□ -1.59
LMX1BO60663 WBP1LP3-201ENST00000523033 208 ntBASIC5.1□□□□□ -1.59
LMX1BO60663 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.1□□□□□ -1.59
LMX1BO60663 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.1□□□□□ -1.59
LMX1BO60663 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.1□□□□□ -1.59
LMX1BO60663 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.1□□□□□ -1.59
LMX1BO60663 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.1□□□□□ -1.59
LMX1BO60663 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.1□□□□□ -1.59
LMX1BO60663 AC091078.2-201ENST00000557145 559 ntBASIC5.1□□□□□ -1.59
LMX1BO60663 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.1□□□□□ -1.59
LMX1BO60663 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.1□□□□□ -1.59
LMX1BO60663 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LMX1BO60663 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.1□□□□□ -1.59
LMX1BO60663 ZNF322P1-201ENST00000568013 1209 ntBASIC5.1□□□□□ -1.59
LMX1BO60663 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.1□□□□□ -1.59
LMX1BO60663 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.1□□□□□ -1.59
LMX1BO60663 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.1□□□□□ -1.59
LMX1BO60663 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.1□□□□□ -1.59
LMX1BO60663 AC025857.2-201ENST00000602711 238 ntBASIC5.1□□□□□ -1.59
LMX1BO60663 MIR6793-201ENST00000612376 63 ntBASIC5.1□□□□□ -1.59
LMX1BO60663 RN7SL787P-201ENST00000613000 284 ntBASIC5.1□□□□□ -1.59
LMX1BO60663 AL050303.3-201ENST00000613704 284 ntBASIC5.1□□□□□ -1.59
LMX1BO60663 AC004477.3-201ENST00000614061 590 ntBASIC5.1□□□□□ -1.59
LMX1BO60663 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.1□□□□□ -1.59
LMX1BO60663 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
LMX1BO60663 OR11H2-202ENST00000641517 1085 ntBASIC5.1□□□□□ -1.59
LMX1BO60663 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LMX1BO60663 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LMX1BO60663 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.1□□□□□ -1.59
LMX1BO60663 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
LMX1BO60663 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LMX1BO60663 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
LMX1BO60663 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
LMX1BO60663 AC025470.1-201ENST00000510053 2032 ntBASIC5.09□□□□□ -1.59
LMX1BO60663 NCOA4P2-201ENST00000340589 1813 ntBASIC5.09□□□□□ -1.59
LMX1BO60663 AC239868.2-201ENST00000564237 4527 ntBASIC5.09□□□□□ -1.59
LMX1BO60663 AC106872.5-201ENST00000508856 1416 ntBASIC5.09□□□□□ -1.59
LMX1BO60663 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
LMX1BO60663 FBXL21-201ENST00000297158 1305 ntBASIC5.09□□□□□ -1.59
LMX1BO60663 AC026523.2-201ENST00000625039 7739 ntBASIC5.09□□□□□ -1.59
LMX1BO60663 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms