Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.36□□□□□ -1.71
SSSCA1O60232 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
SSSCA1O60232 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SSSCA1O60232 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SSSCA1O60232 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SSSCA1O60232 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.36□□□□□ -1.71
SSSCA1O60232 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SSSCA1O60232 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
SSSCA1O60232 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
SSSCA1O60232 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SSSCA1O60232 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
SSSCA1O60232 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SSSCA1O60232 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SSSCA1O60232 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
SSSCA1O60232 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.35□□□□□ -1.71
SSSCA1O60232 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.35□□□□□ -1.71
SSSCA1O60232 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSSCA1O60232 SNORA64.1-201ENST00000362600 132 ntBASIC4.35□□□□□ -1.71
SSSCA1O60232 RN7SKP153-201ENST00000365026 316 ntBASIC4.35□□□□□ -1.71
SSSCA1O60232 GCNT1P4-201ENST00000404096 329 ntBASIC4.35□□□□□ -1.71
SSSCA1O60232 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.35□□□□□ -1.71
SSSCA1O60232 MGAT2P2-201ENST00000427194 797 ntBASIC4.35□□□□□ -1.71
SSSCA1O60232 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
SSSCA1O60232 AC046176.1-201ENST00000435260 1170 ntBASIC4.35□□□□□ -1.71
SSSCA1O60232 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.35□□□□□ -1.71
SSSCA1O60232 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC4.35□□□□□ -1.71
SSSCA1O60232 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.35□□□□□ -1.71
SSSCA1O60232 AC068491.1-201ENST00000449539 1241 ntBASIC4.35□□□□□ -1.71
SSSCA1O60232 AC004890.1-201ENST00000461005 181 ntBASIC4.35□□□□□ -1.71
SSSCA1O60232 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SSSCA1O60232 RPS17P15-201ENST00000475609 349 ntBASIC4.35□□□□□ -1.71
SSSCA1O60232 AC087672.1-201ENST00000479876 766 ntBASIC4.35□□□□□ -1.71
SSSCA1O60232 MTCO1P55-201ENST00000489829 745 ntBASIC4.35□□□□□ -1.71
SSSCA1O60232 GUSBP9-201ENST00000510138 584 ntBASIC4.35□□□□□ -1.71
SSSCA1O60232 AC022360.1-201ENST00000521058 340 ntBASIC4.35□□□□□ -1.71
SSSCA1O60232 CETN3-206ENST00000522864 738 ntTSL 3 BASIC4.35□□□□□ -1.71
SSSCA1O60232 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SSSCA1O60232 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC4.35□□□□□ -1.71
SSSCA1O60232 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.35□□□□□ -1.71
SSSCA1O60232 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC4.35□□□□□ -1.71
SSSCA1O60232 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC4.35□□□□□ -1.71
SSSCA1O60232 AC127381.1-201ENST00000555979 939 ntBASIC4.35□□□□□ -1.71
SSSCA1O60232 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.35□□□□□ -1.71
SSSCA1O60232 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC4.35□□□□□ -1.71
SSSCA1O60232 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
SSSCA1O60232 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC4.35□□□□□ -1.71
SSSCA1O60232 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC4.35□□□□□ -1.71
SSSCA1O60232 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.35□□□□□ -1.71
SSSCA1O60232 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.35□□□□□ -1.71
SSSCA1O60232 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC4.35□□□□□ -1.71
SSSCA1O60232 AP005431.1-201ENST00000618479 319 ntBASIC4.35□□□□□ -1.71
SSSCA1O60232 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC4.35□□□□□ -1.71
SSSCA1O60232 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SSSCA1O60232 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSSCA1O60232 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.35□□□□□ -1.71
SSSCA1O60232 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
SSSCA1O60232 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC4.35□□□□□ -1.71
SSSCA1O60232 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.35□□□□□ -1.71
SSSCA1O60232 AL672167.1-204ENST00000641875 3017 ntBASIC4.35□□□□□ -1.71
SSSCA1O60232 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.35□□□□□ -1.71
SSSCA1O60232 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSSCA1O60232 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSSCA1O60232 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSSCA1O60232 AC068870.3-201ENST00000625077 2536 ntBASIC4.34□□□□□ -1.71
SSSCA1O60232 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SSSCA1O60232 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SSSCA1O60232 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SSSCA1O60232 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
SSSCA1O60232 AC007738.1-201ENST00000413892 348 ntBASIC4.34□□□□□ -1.71
SSSCA1O60232 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4.34□□□□□ -1.71
SSSCA1O60232 GNG5P5-201ENST00000420444 220 ntBASIC4.34□□□□□ -1.71
SSSCA1O60232 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.34□□□□□ -1.71
SSSCA1O60232 AL022331.1-201ENST00000429025 477 ntBASIC4.34□□□□□ -1.71
SSSCA1O60232 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.34□□□□□ -1.71
SSSCA1O60232 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC4.34□□□□□ -1.71
SSSCA1O60232 VN1R110P-201ENST00000438988 971 ntBASIC4.34□□□□□ -1.71
SSSCA1O60232 NPM1P19-201ENST00000450070 712 ntBASIC4.34□□□□□ -1.71
SSSCA1O60232 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC4.34□□□□□ -1.71
SSSCA1O60232 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC4.34□□□□□ -1.71
SSSCA1O60232 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.34□□□□□ -1.71
SSSCA1O60232 AC092754.1-201ENST00000472975 479 ntBASIC4.34□□□□□ -1.71
SSSCA1O60232 RPS3AP15-201ENST00000483874 781 ntBASIC4.34□□□□□ -1.71
SSSCA1O60232 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.34□□□□□ -1.71
SSSCA1O60232 AC112484.3-201ENST00000505910 329 ntBASIC4.34□□□□□ -1.71
SSSCA1O60232 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.34□□□□□ -1.71
SSSCA1O60232 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC4.34□□□□□ -1.71
SSSCA1O60232 RNU6-513P-201ENST00000516104 104 ntBASIC4.34□□□□□ -1.71
SSSCA1O60232 IGKV3D-25-201ENST00000519599 235 ntBASIC4.34□□□□□ -1.71
SSSCA1O60232 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC4.34□□□□□ -1.71
SSSCA1O60232 AC068993.1-201ENST00000546724 589 ntBASIC4.34□□□□□ -1.71
SSSCA1O60232 AC007956.1-201ENST00000555623 542 ntBASIC4.34□□□□□ -1.71
SSSCA1O60232 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC4.34□□□□□ -1.71
SSSCA1O60232 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC4.34□□□□□ -1.71
SSSCA1O60232 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.34□□□□□ -1.71
SSSCA1O60232 AP000648.2-201ENST00000624182 404 ntBASIC4.34□□□□□ -1.71
SSSCA1O60232 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.34□□□□□ -1.71
SSSCA1O60232 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSSCA1O60232 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSSCA1O60232 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.34□□□□□ -1.71
SSSCA1O60232 MTCO1P7-201ENST00000419523 1542 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms