Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SMAD6O43541 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.81□□□□□ -1.48
SMAD6O43541 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.81□□□□□ -1.48
SMAD6O43541 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SMAD6O43541 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SMAD6O43541 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SMAD6O43541 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SMAD6O43541 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.8□□□□□ -1.48
SMAD6O43541 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SMAD6O43541 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
SMAD6O43541 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SMAD6O43541 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SMAD6O43541 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.8□□□□□ -1.48
SMAD6O43541 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SMAD6O43541 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SMAD6O43541 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.8□□□□□ -1.48
SMAD6O43541 GNG5P2-201ENST00000372054 207 ntBASIC5.8□□□□□ -1.48
SMAD6O43541 MIR130A-201ENST00000385274 89 ntBASIC5.8□□□□□ -1.48
SMAD6O43541 AL596448.1-201ENST00000415024 392 ntBASIC5.8□□□□□ -1.48
SMAD6O43541 GTF3AP1-201ENST00000416942 1004 ntBASIC5.8□□□□□ -1.48
SMAD6O43541 NENFP1-201ENST00000419476 466 ntBASIC5.8□□□□□ -1.48
SMAD6O43541 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.8□□□□□ -1.48
SMAD6O43541 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.8□□□□□ -1.48
SMAD6O43541 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.8□□□□□ -1.48
SMAD6O43541 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.8□□□□□ -1.48
SMAD6O43541 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.8□□□□□ -1.48
SMAD6O43541 MTND4P15-201ENST00000437913 1033 ntBASIC5.8□□□□□ -1.48
SMAD6O43541 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC5.8□□□□□ -1.48
SMAD6O43541 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC5.8□□□□□ -1.48
SMAD6O43541 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.8□□□□□ -1.48
SMAD6O43541 RPSAP39-201ENST00000467439 883 ntBASIC5.8□□□□□ -1.48
SMAD6O43541 AC147055.1-201ENST00000509261 750 ntBASIC5.8□□□□□ -1.48
SMAD6O43541 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.8□□□□□ -1.48
SMAD6O43541 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.8□□□□□ -1.48
SMAD6O43541 snoU109.5-201ENST00000516231 132 ntBASIC5.8□□□□□ -1.48
SMAD6O43541 AC026407.1-201ENST00000518369 204 ntBASIC5.8□□□□□ -1.48
SMAD6O43541 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.8□□□□□ -1.48
SMAD6O43541 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SMAD6O43541 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC5.8□□□□□ -1.48
SMAD6O43541 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.8□□□□□ -1.48
SMAD6O43541 AC022404.1-201ENST00000555320 273 ntBASIC5.8□□□□□ -1.48
SMAD6O43541 AC023158.1-201ENST00000561632 1025 ntBASIC5.8□□□□□ -1.48
SMAD6O43541 AC008507.2-201ENST00000588402 1176 ntBASIC5.8□□□□□ -1.48
SMAD6O43541 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.8□□□□□ -1.48
SMAD6O43541 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.8□□□□□ -1.48
SMAD6O43541 AC098483.2-201ENST00000603158 454 ntBASIC5.8□□□□□ -1.48
SMAD6O43541 FO393422.1-201ENST00000603908 708 ntBASIC5.8□□□□□ -1.48
SMAD6O43541 OR8G7P-201ENST00000616658 848 ntBASIC5.8□□□□□ -1.48
SMAD6O43541 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SMAD6O43541 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SMAD6O43541 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
SMAD6O43541 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SMAD6O43541 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SMAD6O43541 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SMAD6O43541 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SMAD6O43541 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
SMAD6O43541 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.79□□□□□ -1.48
SMAD6O43541 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
SMAD6O43541 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
SMAD6O43541 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.79□□□□□ -1.48
SMAD6O43541 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.79□□□□□ -1.48
SMAD6O43541 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
SMAD6O43541 YES1P1-201ENST00000418510 1628 ntBASIC5.79□□□□□ -1.48
SMAD6O43541 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SMAD6O43541 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.79□□□□□ -1.48
SMAD6O43541 MIR323A-201ENST00000362199 86 ntBASIC5.79□□□□□ -1.48
SMAD6O43541 RNA5SP131-201ENST00000365452 119 ntBASIC5.79□□□□□ -1.48
SMAD6O43541 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.79□□□□□ -1.48
SMAD6O43541 RNA5SP91-201ENST00000390902 119 ntBASIC5.79□□□□□ -1.48
SMAD6O43541 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SMAD6O43541 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
SMAD6O43541 RN7SKP293-201ENST00000411389 296 ntBASIC5.79□□□□□ -1.48
SMAD6O43541 OR6E1P-201ENST00000414424 923 ntBASIC5.79□□□□□ -1.48
SMAD6O43541 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.79□□□□□ -1.48
SMAD6O43541 AL513325.1-201ENST00000417716 1034 ntBASIC5.79□□□□□ -1.48
SMAD6O43541 OR51A6P-201ENST00000418680 1004 ntBASIC5.79□□□□□ -1.48
SMAD6O43541 AC234781.4-201ENST00000419384 244 ntBASIC5.79□□□□□ -1.48
SMAD6O43541 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC5.79□□□□□ -1.48
SMAD6O43541 NFYAP1-201ENST00000431953 972 ntBASIC5.79□□□□□ -1.48
SMAD6O43541 AC073410.1-201ENST00000435125 589 ntBASIC5.79□□□□□ -1.48
SMAD6O43541 FMO7P-201ENST00000436045 768 ntBASIC5.79□□□□□ -1.48
SMAD6O43541 AL590762.3-201ENST00000436372 640 ntBASIC5.79□□□□□ -1.48
SMAD6O43541 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC5.79□□□□□ -1.48
SMAD6O43541 AL158053.1-201ENST00000441503 453 ntBASIC5.79□□□□□ -1.48
SMAD6O43541 AC073909.1-201ENST00000447112 999 ntBASIC5.79□□□□□ -1.48
SMAD6O43541 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.79□□□□□ -1.48
SMAD6O43541 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SMAD6O43541 RPS3AP15-201ENST00000483874 781 ntBASIC5.79□□□□□ -1.48
SMAD6O43541 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.79□□□□□ -1.48
SMAD6O43541 AC119751.4-201ENST00000507498 357 ntBASIC5.79□□□□□ -1.48
SMAD6O43541 AC074255.1-201ENST00000511259 501 ntBASIC5.79□□□□□ -1.48
SMAD6O43541 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.79□□□□□ -1.48
SMAD6O43541 OR4R2P-201ENST00000530815 597 ntBASIC5.79□□□□□ -1.48
SMAD6O43541 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.79□□□□□ -1.48
SMAD6O43541 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SMAD6O43541 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.79□□□□□ -1.48
SMAD6O43541 AC126615.2-201ENST00000553003 515 ntBASIC5.79□□□□□ -1.48
SMAD6O43541 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.79□□□□□ -1.48
SMAD6O43541 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SMAD6O43541 AC104695.2-201ENST00000605056 775 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms