Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TMX2-CTNND1H3BSU7 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC007938.2-201ENST00000604666 2634 ntBASIC5.52□□□□□ -1.53
TMX2-CTNND1H3BSU7 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.52□□□□□ -1.53
TMX2-CTNND1H3BSU7 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
TMX2-CTNND1H3BSU7 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TMX2-CTNND1H3BSU7 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
TMX2-CTNND1H3BSU7 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 RN7SKP145-201ENST00000363291 303 ntBASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 RNA5SP131-201ENST00000365452 119 ntBASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 SNORA70-201ENST00000384436 135 ntBASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 DPPA2P2-201ENST00000418220 897 ntBASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC012075.1-201ENST00000436549 580 ntBASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 RPL12P39-201ENST00000455456 496 ntBASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 DEFB109A-201ENST00000482450 265 ntBASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC012123.2-201ENST00000485809 248 ntBASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 snoU109.5-201ENST00000516231 132 ntBASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC126615.2-201ENST00000553003 515 ntBASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 AL049779.2-201ENST00000553847 315 ntBASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 FKBP1AP1-201ENST00000594588 318 ntBASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 AL512329.2-201ENST00000607350 548 ntBASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC016769.4-201ENST00000616893 535 ntBASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 WBP1LP8-201ENST00000617401 327 ntBASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 CASC19-222ENST00000641321 1173 ntBASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 AL442128.2-201ENST00000620246 1824 ntBASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TMX2-CTNND1H3BSU7 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC007342.5-201ENST00000571340 2142 ntBASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 AL159987.1-201ENST00000347911 293 ntBASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 RNA5SP187-201ENST00000384400 119 ntBASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 AL133173.1-201ENST00000423458 397 ntBASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 NPM1P18-201ENST00000434232 732 ntBASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 RPS23P9-201ENST00000448848 438 ntBASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 SBDSP1-204ENST00000453858 737 ntBASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 RPL32P33-201ENST00000487023 394 ntBASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 RN7SL547P-201ENST00000490793 290 ntBASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 OR5M14P-201ENST00000506803 618 ntBASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 CDC42P3-201ENST00000518493 633 ntBASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 HAUS8P1-201ENST00000549005 542 ntBASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC007346.2-201ENST00000564816 892 ntBASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC027216.1-201ENST00000577726 685 ntBASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 152.2 ms