Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 RNA5SP131-201ENST00000365452 119 ntBASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 RN7SKP206-201ENST00000410823 293 ntBASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 OR6E1P-201ENST00000414424 923 ntBASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 AL596448.1-201ENST00000415024 392 ntBASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 REREP1Y-201ENST00000422655 198 ntBASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 RPL5P2-201ENST00000429598 854 ntBASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 FMO7P-201ENST00000436045 768 ntBASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 REREP2Y-201ENST00000439103 200 ntBASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 RPSAP39-201ENST00000467439 883 ntBASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 AC106872.4-201ENST00000510050 523 ntBASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 NPM1P42-201ENST00000560329 862 ntBASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 AGGF1P7-201ENST00000562369 913 ntBASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 FO393422.1-201ENST00000603908 708 ntBASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 AL109620.1-201ENST00000618738 1197 ntBASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 AL035661.1-201ENST00000620459 1144 ntBASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 AP003400.2-201ENST00000624036 666 ntBASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 LINC02019-201ENST00000608605 2060 ntBASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 AC018809.2-201ENST00000602436 3823 ntBASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 OR5T3-201ENST00000303059 1023 ntBASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 RN7SKP293-201ENST00000411389 296 ntBASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 ZNF92P1Y-201ENST00000415010 1191 ntBASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 AL513325.1-201ENST00000417716 1034 ntBASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 HMGB1P32-201ENST00000425971 565 ntBASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 AL450996.1-201ENST00000445574 1202 ntBASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 AC073909.1-201ENST00000447112 999 ntBASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 AC090602.1-201ENST00000469695 252 ntBASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 RPS7P6-201ENST00000485777 579 ntBASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 HIRAP1-201ENST00000605318 787 ntBASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 AC093388.1-201ENST00000609166 430 ntBASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 CU639417.4-201ENST00000623928 207 ntBASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 AL691477.1-201ENST00000624398 162 ntBASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 AL034546.1-201ENST00000623740 3693 ntBASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SNX9Q9Y5X1 AC005261.6-201ENST00000623072 1387 ntBASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 AC022417.1-201ENST00000624768 1303 ntBASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 PWAR1-201ENST00000624188 2414 ntBASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 MIR133A2-201ENST00000347538 102 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms