Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
BLOC1S4Q9NUP1 OR10T1P-201ENST00000424327 947 ntBASIC6.3□□□□□ -1.4
BLOC1S4Q9NUP1 AL662874.1-201ENST00000426065 230 ntBASIC6.3□□□□□ -1.4
BLOC1S4Q9NUP1 AL445528.1-201ENST00000426330 420 ntBASIC6.3□□□□□ -1.4
BLOC1S4Q9NUP1 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.3□□□□□ -1.4
BLOC1S4Q9NUP1 AC006335.2-201ENST00000437993 330 ntBASIC6.3□□□□□ -1.4
BLOC1S4Q9NUP1 AL596266.1-201ENST00000448132 400 ntBASIC6.3□□□□□ -1.4
BLOC1S4Q9NUP1 AC107015.1-201ENST00000466902 747 ntBASIC6.3□□□□□ -1.4
BLOC1S4Q9NUP1 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.3□□□□□ -1.4
BLOC1S4Q9NUP1 SNORD46.2-201ENST00000516021 102 ntBASIC6.3□□□□□ -1.4
BLOC1S4Q9NUP1 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.3□□□□□ -1.4
BLOC1S4Q9NUP1 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.3□□□□□ -1.4
BLOC1S4Q9NUP1 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.3□□□□□ -1.4
BLOC1S4Q9NUP1 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC6.3□□□□□ -1.4
BLOC1S4Q9NUP1 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.3□□□□□ -1.4
BLOC1S4Q9NUP1 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.3□□□□□ -1.4
BLOC1S4Q9NUP1 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.3□□□□□ -1.4
BLOC1S4Q9NUP1 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.3□□□□□ -1.4
BLOC1S4Q9NUP1 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
BLOC1S4Q9NUP1 AC073869.7-201ENST00000640874 297 ntBASIC6.3□□□□□ -1.4
BLOC1S4Q9NUP1 MIR193BHG-214ENST00000641765 509 ntBASIC6.3□□□□□ -1.4
BLOC1S4Q9NUP1 AC079776.5-201ENST00000641920 211 ntBASIC6.3□□□□□ -1.4
BLOC1S4Q9NUP1 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
BLOC1S4Q9NUP1 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
BLOC1S4Q9NUP1 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.3□□□□□ -1.4
BLOC1S4Q9NUP1 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
BLOC1S4Q9NUP1 AC018809.2-201ENST00000602436 3823 ntBASIC6.3□□□□□ -1.4
BLOC1S4Q9NUP1 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.3□□□□□ -1.4
BLOC1S4Q9NUP1 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.3□□□□□ -1.4
BLOC1S4Q9NUP1 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.3□□□□□ -1.4
BLOC1S4Q9NUP1 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
BLOC1S4Q9NUP1 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
BLOC1S4Q9NUP1 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 AC114774.1-201ENST00000507410 1770 ntBASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 RNF10P1-201ENST00000418589 369 ntBASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 FTLP19-201ENST00000433300 394 ntBASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 NANOGP9-201ENST00000439890 892 ntBASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 AC114878.1-201ENST00000441166 358 ntBASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 RPS10P18-201ENST00000442662 495 ntBASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 DNAJC19P5-201ENST00000443295 316 ntBASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 AC083899.1-201ENST00000454465 3819 ntBASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 SNORD125-201ENST00000459538 96 ntBASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 RNU6-615P-201ENST00000516065 106 ntBASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 IGKV2-19-201ENST00000518132 283 ntBASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 AC022826.1-201ENST00000519383 805 ntBASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 MIR4311-201ENST00000580794 100 ntBASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 MIR6778-201ENST00000617912 73 ntBASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 AP005432.1-201ENST00000580891 3485 ntBASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 AC104964.3-201ENST00000606115 2860 ntBASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
BLOC1S4Q9NUP1 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
BLOC1S4Q9NUP1 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
BLOC1S4Q9NUP1 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
BLOC1S4Q9NUP1 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
BLOC1S4Q9NUP1 AC015689.2-201ENST00000528172 1738 ntBASIC6.28□□□□□ -1.4
BLOC1S4Q9NUP1 OR51C1P-202ENST00000641159 1444 ntBASIC6.28□□□□□ -1.4
BLOC1S4Q9NUP1 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
BLOC1S4Q9NUP1 AC023490.2-201ENST00000359859 470 ntBASIC6.28□□□□□ -1.4
BLOC1S4Q9NUP1 AL157884.3-201ENST00000448273 1184 ntBASIC6.28□□□□□ -1.4
BLOC1S4Q9NUP1 MORF4L1P4-201ENST00000450245 976 ntBASIC6.28□□□□□ -1.4
BLOC1S4Q9NUP1 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.28□□□□□ -1.4
BLOC1S4Q9NUP1 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
BLOC1S4Q9NUP1 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.28□□□□□ -1.4
BLOC1S4Q9NUP1 SNORA43.3-201ENST00000517240 103 ntBASIC6.28□□□□□ -1.4
BLOC1S4Q9NUP1 AC074029.2-201ENST00000551045 634 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms