Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 RPS7P2-201ENST00000435134 607 ntBASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 AC013403.1-201ENST00000436954 263 ntBASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 PA2G4P6-201ENST00000438325 1197 ntBASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 MED6P1-201ENST00000439659 713 ntBASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 AC007383.1-201ENST00000445875 636 ntBASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 AC239798.3-201ENST00000454459 408 ntBASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 TPT1P1-201ENST00000458495 518 ntBASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 AC010374.1-201ENST00000503762 1237 ntBASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 UGT2A3P7-201ENST00000510485 734 ntBASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 MT1CP-201ENST00000567054 174 ntBASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 RN7SL230P-201ENST00000580835 303 ntBASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 AP001267.4-201ENST00000602598 545 ntBASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 AL606834.3-201ENST00000602615 496 ntBASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 AC005479.3-201ENST00000602790 431 ntBASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 AP001823.1-201ENST00000604056 1003 ntBASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 AC099785.1-201ENST00000605697 437 ntBASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 AC025175.1-201ENST00000606482 759 ntBASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 AC012676.3-201ENST00000614983 479 ntBASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 AC140725.3-201ENST00000616193 880 ntBASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 RMST_10.1-201ENST00000616309 154 ntBASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 AL137067.2-201ENST00000621202 131 ntBASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 AC069234.4-201ENST00000621276 412 ntBASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 AC097655.1-201ENST00000635075 318 ntBASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 AC011503.2-201ENST00000594230 1500 ntBASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 SPATA2P1-201ENST00000431223 2055 ntBASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 MSL3P1-202ENST00000440028 1468 ntBASIC6.02□□□□□ -1.44
TRIM54Q9BYV2 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.02□□□□□ -1.44
TRIM54Q9BYV2 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 RNA5SP514-201ENST00000363717 111 ntBASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 AL121977.1-201ENST00000401636 979 ntBASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 ZNF602P-201ENST00000405929 924 ntBASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 RN7SKP146-201ENST00000410242 334 ntBASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 RNA5SP156-201ENST00000410250 110 ntBASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 PNRC2P1-201ENST00000423940 420 ntBASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 CYCSP42-201ENST00000450823 238 ntBASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 snoU13.29-201ENST00000459370 104 ntBASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 RN7SL552P-201ENST00000462094 276 ntBASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 H3F3AP5-201ENST00000475267 429 ntBASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 AC098583.1-201ENST00000480875 255 ntBASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 AC005017.1-201ENST00000482002 490 ntBASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 EIF1P7-201ENST00000487533 337 ntBASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 RN7SL612P-201ENST00000497704 295 ntBASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 AC108103.1-201ENST00000511286 446 ntBASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms