Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 OR4A43P-201ENST00000532938 908 ntBASIC6.94□□□□□ -1.3
SHANK3Q9BYB0 PARP1P2-201ENST00000556806 195 ntBASIC6.94□□□□□ -1.3
SHANK3Q9BYB0 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.94□□□□□ -1.3
SHANK3Q9BYB0 PDCD6IPP2-207ENST00000566321 1069 ntBASIC6.94□□□□□ -1.3
SHANK3Q9BYB0 AC068724.3-201ENST00000625906 87 ntBASIC6.94□□□□□ -1.3
SHANK3Q9BYB0 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.94□□□□□ -1.3
SHANK3Q9BYB0 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SHANK3Q9BYB0 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
SHANK3Q9BYB0 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SHANK3Q9BYB0 AL008638.3-201ENST00000623027 5182 ntBASIC6.94□□□□□ -1.3
SHANK3Q9BYB0 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.94□□□□□ -1.3
SHANK3Q9BYB0 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.94□□□□□ -1.3
SHANK3Q9BYB0 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
SHANK3Q9BYB0 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
SHANK3Q9BYB0 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.94□□□□□ -1.3
SHANK3Q9BYB0 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SHANK3Q9BYB0 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SHANK3Q9BYB0 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC6.94□□□□□ -1.3
SHANK3Q9BYB0 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.94□□□□□ -1.3
SHANK3Q9BYB0 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SHANK3Q9BYB0 AC007114.2-201ENST00000576014 4281 ntBASIC6.94□□□□□ -1.3
SHANK3Q9BYB0 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
SHANK3Q9BYB0 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SHANK3Q9BYB0 MIR23B-201ENST00000384832 97 ntBASIC6.93□□□□□ -1.3
SHANK3Q9BYB0 SNORA11.2-201ENST00000408318 127 ntBASIC6.93□□□□□ -1.3
SHANK3Q9BYB0 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.93□□□□□ -1.3
SHANK3Q9BYB0 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.93□□□□□ -1.3
SHANK3Q9BYB0 AC022034.3-201ENST00000471393 478 ntBASIC6.93□□□□□ -1.3
SHANK3Q9BYB0 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.93□□□□□ -1.3
SHANK3Q9BYB0 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC6.93□□□□□ -1.3
SHANK3Q9BYB0 AL031320.1-201ENST00000604177 357 ntBASIC6.93□□□□□ -1.3
SHANK3Q9BYB0 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC6.93□□□□□ -1.3
SHANK3Q9BYB0 AC074101.1-201ENST00000637861 241 ntBASIC6.93□□□□□ -1.3
SHANK3Q9BYB0 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SHANK3Q9BYB0 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SHANK3Q9BYB0 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.93□□□□□ -1.3
SHANK3Q9BYB0 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
SHANK3Q9BYB0 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SHANK3Q9BYB0 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.93□□□□□ -1.3
SHANK3Q9BYB0 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SHANK3Q9BYB0 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC6.93□□□□□ -1.3
SHANK3Q9BYB0 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SHANK3Q9BYB0 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SHANK3Q9BYB0 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
SHANK3Q9BYB0 THAP12P4-201ENST00000528321 2266 ntBASIC6.93□□□□□ -1.3
SHANK3Q9BYB0 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.93□□□□□ -1.3
SHANK3Q9BYB0 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.93□□□□□ -1.3
SHANK3Q9BYB0 RPL18P10-201ENST00000425606 538 ntBASIC6.93□□□□□ -1.3
SHANK3Q9BYB0 CRIP1P1-201ENST00000427567 185 ntBASIC6.93□□□□□ -1.3
SHANK3Q9BYB0 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.93□□□□□ -1.3
SHANK3Q9BYB0 AC073264.2-201ENST00000448886 166 ntBASIC6.93□□□□□ -1.3
SHANK3Q9BYB0 CYCSP42-201ENST00000450823 238 ntBASIC6.93□□□□□ -1.3
SHANK3Q9BYB0 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC6.93□□□□□ -1.3
SHANK3Q9BYB0 BTF3P13-201ENST00000513224 490 ntBASIC6.93□□□□□ -1.3
SHANK3Q9BYB0 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC6.93□□□□□ -1.3
SHANK3Q9BYB0 AC122688.1-201ENST00000541494 223 ntBASIC6.93□□□□□ -1.3
SHANK3Q9BYB0 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC6.93□□□□□ -1.3
SHANK3Q9BYB0 TEX41-238ENST00000604253 709 ntTSL 5 BASIC6.93□□□□□ -1.3
SHANK3Q9BYB0 MEMO1P5-201ENST00000604810 406 ntBASIC6.93□□□□□ -1.3
SHANK3Q9BYB0 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
SHANK3Q9BYB0 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SHANK3Q9BYB0 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SHANK3Q9BYB0 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SHANK3Q9BYB0 AC114774.1-201ENST00000507410 1770 ntBASIC6.92□□□□□ -1.3
SHANK3Q9BYB0 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SHANK3Q9BYB0 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SHANK3Q9BYB0 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SHANK3Q9BYB0 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC6.92□□□□□ -1.3
SHANK3Q9BYB0 AC063976.2-201ENST00000425667 3556 ntBASIC6.92□□□□□ -1.3
SHANK3Q9BYB0 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SHANK3Q9BYB0 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SHANK3Q9BYB0 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.92□□□□□ -1.3
SHANK3Q9BYB0 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SHANK3Q9BYB0 AL078599.1-201ENST00000402075 293 ntBASIC6.92□□□□□ -1.3
SHANK3Q9BYB0 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC6.92□□□□□ -1.3
SHANK3Q9BYB0 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.92□□□□□ -1.3
SHANK3Q9BYB0 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.92□□□□□ -1.3
SHANK3Q9BYB0 KNOP1P3-201ENST00000446933 426 ntBASIC6.92□□□□□ -1.3
SHANK3Q9BYB0 AL513533.1-201ENST00000453728 415 ntBASIC6.92□□□□□ -1.3
SHANK3Q9BYB0 HMGB1P23-201ENST00000518743 568 ntBASIC6.92□□□□□ -1.3
SHANK3Q9BYB0 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.92□□□□□ -1.3
SHANK3Q9BYB0 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
SHANK3Q9BYB0 MIR4270-201ENST00000581799 70 ntBASIC6.92□□□□□ -1.3
SHANK3Q9BYB0 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
SHANK3Q9BYB0 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SHANK3Q9BYB0 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
SHANK3Q9BYB0 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
SHANK3Q9BYB0 ZNF969P-201ENST00000510345 2341 ntBASIC6.91□□□□□ -1.3
SHANK3Q9BYB0 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
SHANK3Q9BYB0 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SHANK3Q9BYB0 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.91□□□□□ -1.3
SHANK3Q9BYB0 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SHANK3Q9BYB0 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.91□□□□□ -1.3
SHANK3Q9BYB0 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SHANK3Q9BYB0 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
SHANK3Q9BYB0 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
SHANK3Q9BYB0 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
SHANK3Q9BYB0 AC004975.1-201ENST00000428733 208 ntBASIC6.91□□□□□ -1.3
SHANK3Q9BYB0 BRD7P6-201ENST00000431406 1860 ntBASIC6.91□□□□□ -1.3
SHANK3Q9BYB0 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms