Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ABCA3Q99758 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC7.05□□□□□ -1.28
ABCA3Q99758 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ABCA3Q99758 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ABCA3Q99758 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ABCA3Q99758 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
ABCA3Q99758 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
ABCA3Q99758 FHIT-201ENST00000341848 174 ntTSL 3 BASIC7.05□□□□□ -1.28
ABCA3Q99758 MIR23A-201ENST00000385245 73 ntBASIC7.05□□□□□ -1.28
ABCA3Q99758 GJA6P-201ENST00000415117 1042 ntBASIC7.05□□□□□ -1.28
ABCA3Q99758 OR10T1P-201ENST00000424327 947 ntBASIC7.05□□□□□ -1.28
ABCA3Q99758 DNAJC19P7-201ENST00000428811 344 ntBASIC7.05□□□□□ -1.28
ABCA3Q99758 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC7.05□□□□□ -1.28
ABCA3Q99758 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC7.05□□□□□ -1.28
ABCA3Q99758 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC7.05□□□□□ -1.28
ABCA3Q99758 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC7.05□□□□□ -1.28
ABCA3Q99758 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC7.05□□□□□ -1.28
ABCA3Q99758 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
ABCA3Q99758 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC7.05□□□□□ -1.28
ABCA3Q99758 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
ABCA3Q99758 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ABCA3Q99758 AC005034.3-201ENST00000604845 1747 ntBASIC7.05□□□□□ -1.28
ABCA3Q99758 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ABCA3Q99758 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC7.05□□□□□ -1.28
ABCA3Q99758 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
ABCA3Q99758 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ABCA3Q99758 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ABCA3Q99758 SNORA70H-201ENST00000383910 135 ntBASIC7.04□□□□□ -1.28
ABCA3Q99758 SNORA70J-201ENST00000384182 135 ntBASIC7.04□□□□□ -1.28
ABCA3Q99758 MIR1182-201ENST00000408363 97 ntBASIC7.04□□□□□ -1.28
ABCA3Q99758 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
ABCA3Q99758 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC7.04□□□□□ -1.28
ABCA3Q99758 RNGTTP1-201ENST00000420965 728 ntBASIC7.04□□□□□ -1.28
ABCA3Q99758 RSL24D1P6-201ENST00000426934 401 ntBASIC7.04□□□□□ -1.28
ABCA3Q99758 FABP5P2-201ENST00000439042 408 ntBASIC7.04□□□□□ -1.28
ABCA3Q99758 AL354714.3-201ENST00000447284 493 ntBASIC7.04□□□□□ -1.28
ABCA3Q99758 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC7.04□□□□□ -1.28
ABCA3Q99758 GAPDHP56-201ENST00000506031 988 ntBASIC7.04□□□□□ -1.28
ABCA3Q99758 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC7.04□□□□□ -1.28
ABCA3Q99758 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC7.04□□□□□ -1.28
ABCA3Q99758 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC7.04□□□□□ -1.28
ABCA3Q99758 SSX9-202ENST00000608568 580 ntTSL 4 BASIC7.04□□□□□ -1.28
ABCA3Q99758 AP005131.7-201ENST00000610087 611 ntBASIC7.04□□□□□ -1.28
ABCA3Q99758 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
ABCA3Q99758 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
ABCA3Q99758 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ABCA3Q99758 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ABCA3Q99758 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC7.04□□□□□ -1.28
ABCA3Q99758 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC7.04□□□□□ -1.28
ABCA3Q99758 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ABCA3Q99758 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ABCA3Q99758 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ABCA3Q99758 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ABCA3Q99758 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ABCA3Q99758 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ABCA3Q99758 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.04□□□□□ -1.28
ABCA3Q99758 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
ABCA3Q99758 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
ABCA3Q99758 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
ABCA3Q99758 SNORA70.2-201ENST00000364506 135 ntBASIC7.04□□□□□ -1.28
ABCA3Q99758 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
ABCA3Q99758 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
ABCA3Q99758 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC7.04□□□□□ -1.28
ABCA3Q99758 CHIAP3-201ENST00000423668 1133 ntBASIC7.04□□□□□ -1.28
ABCA3Q99758 AL365220.1-201ENST00000432923 399 ntBASIC7.04□□□□□ -1.28
ABCA3Q99758 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC7.04□□□□□ -1.28
ABCA3Q99758 REG1CP-206ENST00000447469 496 ntBASIC7.04□□□□□ -1.28
ABCA3Q99758 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ABCA3Q99758 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC7.04□□□□□ -1.28
ABCA3Q99758 IGKV1-32-201ENST00000519290 311 ntBASIC7.04□□□□□ -1.28
ABCA3Q99758 AC008033.2-201ENST00000542626 177 ntBASIC7.04□□□□□ -1.28
ABCA3Q99758 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
ABCA3Q99758 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
ABCA3Q99758 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
ABCA3Q99758 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC7.03□□□□□ -1.28
ABCA3Q99758 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
ABCA3Q99758 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
ABCA3Q99758 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC7.03□□□□□ -1.28
ABCA3Q99758 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
ABCA3Q99758 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC7.03□□□□□ -1.28
ABCA3Q99758 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
ABCA3Q99758 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
ABCA3Q99758 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC7.03□□□□□ -1.28
ABCA3Q99758 HNRNPA1P54-201ENST00000411857 9714 ntBASIC7.03□□□□□ -1.28
ABCA3Q99758 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
ABCA3Q99758 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
ABCA3Q99758 SNORA62-201ENST00000365493 153 ntBASIC7.03□□□□□ -1.28
ABCA3Q99758 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC7.03□□□□□ -1.28
ABCA3Q99758 TXNP5-201ENST00000441043 315 ntBASIC7.03□□□□□ -1.28
ABCA3Q99758 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
ABCA3Q99758 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC7.03□□□□□ -1.28
ABCA3Q99758 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC7.03□□□□□ -1.28
ABCA3Q99758 OR4A43P-201ENST00000532938 908 ntBASIC7.03□□□□□ -1.28
ABCA3Q99758 AC122688.1-201ENST00000541494 223 ntBASIC7.03□□□□□ -1.28
ABCA3Q99758 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC7.03□□□□□ -1.28
ABCA3Q99758 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC7.03□□□□□ -1.28
ABCA3Q99758 AC136624.4-201ENST00000573044 370 ntBASIC7.03□□□□□ -1.28
ABCA3Q99758 AC005252.1-201ENST00000604518 1063 ntBASIC7.03□□□□□ -1.28
ABCA3Q99758 AC245389.2-201ENST00000616023 576 ntBASIC7.03□□□□□ -1.28
ABCA3Q99758 AC242843.1-201ENST00000618702 573 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms