Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RNA5SP326-201ENST00000363209 110 ntBASIC5.78□□□□□ -1.48
RPRD1AQ96P16 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.78□□□□□ -1.48
RPRD1AQ96P16 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RPRD1AQ96P16 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.78□□□□□ -1.48
RPRD1AQ96P16 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.78□□□□□ -1.48
RPRD1AQ96P16 RPL12P18-201ENST00000437175 325 ntBASIC5.78□□□□□ -1.48
RPRD1AQ96P16 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
RPRD1AQ96P16 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.78□□□□□ -1.48
RPRD1AQ96P16 AL450023.1-201ENST00000450868 751 ntBASIC5.78□□□□□ -1.48
RPRD1AQ96P16 VDAC2P4-201ENST00000452925 711 ntBASIC5.78□□□□□ -1.48
RPRD1AQ96P16 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.78□□□□□ -1.48
RPRD1AQ96P16 AC017007.3-201ENST00000479865 435 ntBASIC5.78□□□□□ -1.48
RPRD1AQ96P16 AC093719.1-201ENST00000480427 441 ntBASIC5.78□□□□□ -1.48
RPRD1AQ96P16 AL136038.1-201ENST00000497246 351 ntBASIC5.78□□□□□ -1.48
RPRD1AQ96P16 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.78□□□□□ -1.48
RPRD1AQ96P16 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.78□□□□□ -1.48
RPRD1AQ96P16 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.78□□□□□ -1.48
RPRD1AQ96P16 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.78□□□□□ -1.48
RPRD1AQ96P16 PMS2P3-207ENST00000529061 717 ntBASIC5.78□□□□□ -1.48
RPRD1AQ96P16 AC027026.1-201ENST00000532323 742 ntBASIC5.78□□□□□ -1.48
RPRD1AQ96P16 AC137627.1-201ENST00000545761 289 ntBASIC5.78□□□□□ -1.48
RPRD1AQ96P16 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.78□□□□□ -1.48
RPRD1AQ96P16 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.78□□□□□ -1.48
RPRD1AQ96P16 MIR1273E-201ENST00000581165 102 ntBASIC5.78□□□□□ -1.48
RPRD1AQ96P16 AL589674.2-201ENST00000604304 337 ntBASIC5.78□□□□□ -1.48
RPRD1AQ96P16 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
RPRD1AQ96P16 MIR6729-201ENST00000618194 65 ntBASIC5.78□□□□□ -1.48
RPRD1AQ96P16 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RPRD1AQ96P16 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.78□□□□□ -1.48
RPRD1AQ96P16 AL049767.1-202ENST00000637826 242 ntBASIC5.78□□□□□ -1.48
RPRD1AQ96P16 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
RPRD1AQ96P16 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RPRD1AQ96P16 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
RPRD1AQ96P16 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RPRD1AQ96P16 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.78□□□□□ -1.48
RPRD1AQ96P16 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.78□□□□□ -1.48
RPRD1AQ96P16 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.78□□□□□ -1.48
RPRD1AQ96P16 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
RPRD1AQ96P16 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RPRD1AQ96P16 AC144833.1-201ENST00000567953 4089 ntBASIC5.78□□□□□ -1.48
RPRD1AQ96P16 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.77□□□□□ -1.48
RPRD1AQ96P16 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RPRD1AQ96P16 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
RPRD1AQ96P16 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
RPRD1AQ96P16 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
RPRD1AQ96P16 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RPRD1AQ96P16 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RPRD1AQ96P16 AC005042.1-201ENST00000393397 800 ntBASIC5.77□□□□□ -1.49
RPRD1AQ96P16 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.77□□□□□ -1.49
RPRD1AQ96P16 RNF10P1-201ENST00000418589 369 ntBASIC5.77□□□□□ -1.49
RPRD1AQ96P16 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.77□□□□□ -1.49
RPRD1AQ96P16 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.77□□□□□ -1.49
RPRD1AQ96P16 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.77□□□□□ -1.49
RPRD1AQ96P16 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.77□□□□□ -1.49
RPRD1AQ96P16 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
RPRD1AQ96P16 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.77□□□□□ -1.49
RPRD1AQ96P16 AC025574.2-201ENST00000615621 514 ntBASIC5.77□□□□□ -1.49
RPRD1AQ96P16 AC073869.7-201ENST00000640874 297 ntBASIC5.77□□□□□ -1.49
RPRD1AQ96P16 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RPRD1AQ96P16 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
RPRD1AQ96P16 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.77□□□□□ -1.49
RPRD1AQ96P16 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
RPRD1AQ96P16 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RPRD1AQ96P16 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RPRD1AQ96P16 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.76□□□□□ -1.49
RPRD1AQ96P16 AC068870.1-201ENST00000563737 2455 ntBASIC5.76□□□□□ -1.49
RPRD1AQ96P16 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RPRD1AQ96P16 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
RPRD1AQ96P16 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
RPRD1AQ96P16 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.76□□□□□ -1.49
RPRD1AQ96P16 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
RPRD1AQ96P16 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.76□□□□□ -1.49
RPRD1AQ96P16 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
RPRD1AQ96P16 AC104964.3-201ENST00000606115 2860 ntBASIC5.76□□□□□ -1.49
RPRD1AQ96P16 AL121886.1-201ENST00000358609 435 ntBASIC5.76□□□□□ -1.49
RPRD1AQ96P16 RN7SKP124-201ENST00000364730 341 ntBASIC5.76□□□□□ -1.49
RPRD1AQ96P16 RN7SKP28-201ENST00000364770 305 ntBASIC5.76□□□□□ -1.49
RPRD1AQ96P16 RNU4-2-201ENST00000365668 141 ntBASIC5.76□□□□□ -1.49
RPRD1AQ96P16 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
RPRD1AQ96P16 AL009179.1-201ENST00000406085 265 ntBASIC5.76□□□□□ -1.49
RPRD1AQ96P16 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.76□□□□□ -1.49
RPRD1AQ96P16 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.76□□□□□ -1.49
RPRD1AQ96P16 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.76□□□□□ -1.49
RPRD1AQ96P16 NANOGP9-201ENST00000439890 892 ntBASIC5.76□□□□□ -1.49
RPRD1AQ96P16 AL390119.1-201ENST00000440329 312 ntBASIC5.76□□□□□ -1.49
RPRD1AQ96P16 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.76□□□□□ -1.49
RPRD1AQ96P16 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RPRD1AQ96P16 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.76□□□□□ -1.49
RPRD1AQ96P16 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.76□□□□□ -1.49
RPRD1AQ96P16 RNA5SP362-201ENST00000516048 118 ntBASIC5.76□□□□□ -1.49
RPRD1AQ96P16 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.76□□□□□ -1.49
RPRD1AQ96P16 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.76□□□□□ -1.49
RPRD1AQ96P16 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.76□□□□□ -1.49
RPRD1AQ96P16 AL353729.2-201ENST00000605859 1249 ntBASIC5.76□□□□□ -1.49
RPRD1AQ96P16 RNU6-84P-201ENST00000607737 102 ntBASIC5.76□□□□□ -1.49
RPRD1AQ96P16 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.76□□□□□ -1.49
RPRD1AQ96P16 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.76□□□□□ -1.49
RPRD1AQ96P16 RNA5SP439-201ENST00000617595 124 ntBASIC5.76□□□□□ -1.49
RPRD1AQ96P16 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
RPRD1AQ96P16 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms