Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 SSXP3-201ENST00000442971 1300 ntBASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 AL513548.1-201ENST00000562904 1724 ntBASIC5.43□□□□□ -1.54
CLIP4Q8N3C7 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 AC012254.3-201ENST00000591183 2117 ntBASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 SELENOWP1-201ENST00000322792 252 ntBASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 MIR130B-202ENST00000385018 82 ntBASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 RN7SKP86-201ENST00000410454 332 ntBASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 MTND4LP21-201ENST00000415303 295 ntBASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 AC079809.1-201ENST00000415468 276 ntBASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 AL359885.1-201ENST00000415786 903 ntBASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 AC073464.3-201ENST00000422564 712 ntBASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 RPL5P7-201ENST00000444235 813 ntBASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 RPL12P39-201ENST00000455456 496 ntBASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 ATP5G1P3-201ENST00000463301 410 ntBASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 AC023245.1-201ENST00000468501 517 ntBASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 AC091874.2-201ENST00000505889 720 ntBASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 FTH1P11-201ENST00000517577 551 ntBASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 AC009879.1-201ENST00000520029 839 ntBASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 KCTD9P6-201ENST00000522306 950 ntBASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 OR8Q1P-201ENST00000526467 655 ntBASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 OR4A42P-201ENST00000531397 938 ntBASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 CD69-203ENST00000536709 1020 ntTSL 2 BASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 MTND2P17-201ENST00000550281 688 ntBASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 AC092332.1-201ENST00000563684 829 ntBASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 GARSP1-201ENST00000570895 719 ntBASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 AC060780.2-201ENST00000589047 198 ntBASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 AL022394.1-201ENST00000606979 292 ntBASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 AC018754.1-201ENST00000607486 925 ntBASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 AL133481.2-203ENST00000607558 139 ntBASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 AC084036.1-201ENST00000609190 508 ntBASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 AC063944.3-201ENST00000609969 533 ntBASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 BNIP3P41-202ENST00000616656 861 ntBASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 AL590410.1-201ENST00000617925 333 ntBASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 AL445670.1-201ENST00000618889 801 ntBASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 AC096708.4-201ENST00000620563 552 ntBASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 AL136228.1-201ENST00000622221 319 ntBASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 AP006248.3-201ENST00000623580 594 ntBASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 AC079776.5-201ENST00000641920 211 ntBASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 AL137058.3-201ENST00000624531 3099 ntBASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLIP4Q8N3C7 HSPD1P9-201ENST00000420325 1636 ntBASIC5.41□□□□□ -1.54
CLIP4Q8N3C7 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.41□□□□□ -1.54
CLIP4Q8N3C7 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.41□□□□□ -1.54
CLIP4Q8N3C7 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
CLIP4Q8N3C7 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.41□□□□□ -1.54
CLIP4Q8N3C7 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CLIP4Q8N3C7 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.41□□□□□ -1.54
CLIP4Q8N3C7 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLIP4Q8N3C7 RNU6-618P-201ENST00000363518 112 ntBASIC5.41□□□□□ -1.54
CLIP4Q8N3C7 RN7SKP171-201ENST00000364417 303 ntBASIC5.41□□□□□ -1.54
CLIP4Q8N3C7 SNORA27.3-201ENST00000364937 134 ntBASIC5.41□□□□□ -1.54
CLIP4Q8N3C7 SNORA51.9-201ENST00000384295 124 ntBASIC5.41□□□□□ -1.54
CLIP4Q8N3C7 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLIP4Q8N3C7 RN7SKP199-201ENST00000410325 305 ntBASIC5.41□□□□□ -1.54
CLIP4Q8N3C7 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.41□□□□□ -1.54
CLIP4Q8N3C7 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.41□□□□□ -1.54
CLIP4Q8N3C7 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.41□□□□□ -1.54
CLIP4Q8N3C7 AL121878.1-201ENST00000418638 859 ntBASIC5.41□□□□□ -1.54
CLIP4Q8N3C7 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms