Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 EEF1A1P16-201ENST00000325349 1414 ntBASIC6.4□□□□□ -1.39
ATG4DQ86TL0 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
ATG4DQ86TL0 CNOT6LP1-201ENST00000559681 1462 ntBASIC6.4□□□□□ -1.39
ATG4DQ86TL0 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
ATG4DQ86TL0 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
ATG4DQ86TL0 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
ATG4DQ86TL0 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
ATG4DQ86TL0 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
ATG4DQ86TL0 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 MTND5P26-201ENST00000426018 1752 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 OR10J6P-201ENST00000289731 930 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 RNU1-87P-201ENST00000363727 170 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 RNU6-348P-201ENST00000384386 107 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 MT-TL1-201ENST00000386347 75 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 RNU6-932P-201ENST00000391108 106 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 AL161742.1-201ENST00000418154 584 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 Z99497.1-201ENST00000421282 135 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 AL022400.1-201ENST00000423946 935 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 AC027124.1-201ENST00000440852 466 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 Z99127.3-201ENST00000448158 395 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 CDC42P1-201ENST00000456658 548 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 CCNJP2-201ENST00000457810 1163 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 BX323845.2-201ENST00000458382 234 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 AC091982.1-202ENST00000473923 343 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 MYL6P4-201ENST00000477911 453 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 AC096743.1-201ENST00000485172 319 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 RPL5P33-201ENST00000487833 905 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 AC018639.1-201ENST00000492994 442 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 OR10J9P-201ENST00000511932 987 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 SETP21-201ENST00000514799 892 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 HNRNPKP5-201ENST00000515300 253 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 SCARNA6-201ENST00000515982 265 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 RPS20-202ENST00000518875 671 ntTSL 2 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 OXR1-212ENST00000521592 993 ntTSL 5 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 AP001646.2-201ENST00000528645 1156 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 SSU72P6-201ENST00000532644 488 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 AP000619.3-201ENST00000535634 1127 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 AL442663.2-201ENST00000554385 511 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 FXNP1-201ENST00000555153 337 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 AC091489.2-201ENST00000566263 604 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 ACTG1P15-201ENST00000570019 1063 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 MIR378H-201ENST00000579966 83 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 AC006504.3-201ENST00000586818 523 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 AC111186.1-201ENST00000604684 130 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 AC092354.1-201ENST00000606057 376 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 AC104458.1-201ENST00000608243 463 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 AL592148.2-201ENST00000612210 372 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 AC027506.1-201ENST00000621395 198 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 AC012414.7-202ENST00000622705 1090 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 AL049541.2-201ENST00000626377 555 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 TEX41-279ENST00000629149 609 ntTSL 5 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 PCMTD1P7-201ENST00000634506 357 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 JAML-213ENST00000640745 951 ntTSL 5 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms