Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC117434.1-201ENST00000419971 836 ntBASIC6.48□□□□□ -1.37
SHROOM1Q2M3G4 AC007161.1-204ENST00000423039 460 ntBASIC6.48□□□□□ -1.37
SHROOM1Q2M3G4 SRSF1P1-201ENST00000424058 520 ntBASIC6.48□□□□□ -1.37
SHROOM1Q2M3G4 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
SHROOM1Q2M3G4 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC6.48□□□□□ -1.37
SHROOM1Q2M3G4 RSU1P1-201ENST00000453416 441 ntBASIC6.48□□□□□ -1.37
SHROOM1Q2M3G4 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.48□□□□□ -1.37
SHROOM1Q2M3G4 CBX1P5-201ENST00000475330 559 ntBASIC6.48□□□□□ -1.37
SHROOM1Q2M3G4 AC004453.1-201ENST00000487895 408 ntBASIC6.48□□□□□ -1.37
SHROOM1Q2M3G4 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SHROOM1Q2M3G4 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC6.48□□□□□ -1.37
SHROOM1Q2M3G4 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.48□□□□□ -1.37
SHROOM1Q2M3G4 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.48□□□□□ -1.37
SHROOM1Q2M3G4 AL049779.2-201ENST00000553847 315 ntBASIC6.48□□□□□ -1.37
SHROOM1Q2M3G4 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.48□□□□□ -1.37
SHROOM1Q2M3G4 RPL10P14-201ENST00000565265 298 ntBASIC6.48□□□□□ -1.37
SHROOM1Q2M3G4 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.48□□□□□ -1.37
SHROOM1Q2M3G4 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.48□□□□□ -1.37
SHROOM1Q2M3G4 AC006115.2-201ENST00000596823 202 ntBASIC6.48□□□□□ -1.37
SHROOM1Q2M3G4 HIRAP1-201ENST00000605318 787 ntBASIC6.48□□□□□ -1.37
SHROOM1Q2M3G4 AL139407.1-201ENST00000613826 1175 ntBASIC6.48□□□□□ -1.37
SHROOM1Q2M3G4 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.48□□□□□ -1.37
SHROOM1Q2M3G4 AC144833.1-201ENST00000567953 4089 ntBASIC6.48□□□□□ -1.37
SHROOM1Q2M3G4 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
SHROOM1Q2M3G4 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.48□□□□□ -1.37
SHROOM1Q2M3G4 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
SHROOM1Q2M3G4 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SHROOM1Q2M3G4 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
SHROOM1Q2M3G4 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC6.48□□□□□ -1.37
SHROOM1Q2M3G4 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
SHROOM1Q2M3G4 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.48□□□□□ -1.37
SHROOM1Q2M3G4 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
SHROOM1Q2M3G4 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SHROOM1Q2M3G4 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SHROOM1Q2M3G4 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
SHROOM1Q2M3G4 AC011493.1-201ENST00000596753 1632 ntBASIC6.47□□□□□ -1.37
SHROOM1Q2M3G4 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SHROOM1Q2M3G4 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SHROOM1Q2M3G4 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SHROOM1Q2M3G4 RNA5SP251-201ENST00000410614 137 ntBASIC6.47□□□□□ -1.37
SHROOM1Q2M3G4 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC6.47□□□□□ -1.37
SHROOM1Q2M3G4 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.47□□□□□ -1.37
SHROOM1Q2M3G4 AL590762.4-201ENST00000425885 253 ntBASIC6.47□□□□□ -1.37
SHROOM1Q2M3G4 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.47□□□□□ -1.37
SHROOM1Q2M3G4 AL596266.1-201ENST00000448132 400 ntBASIC6.47□□□□□ -1.37
SHROOM1Q2M3G4 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.47□□□□□ -1.37
SHROOM1Q2M3G4 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.47□□□□□ -1.37
SHROOM1Q2M3G4 RPS18P6-201ENST00000476880 458 ntBASIC6.47□□□□□ -1.37
SHROOM1Q2M3G4 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.47□□□□□ -1.37
SHROOM1Q2M3G4 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC6.47□□□□□ -1.37
SHROOM1Q2M3G4 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
SHROOM1Q2M3G4 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC6.47□□□□□ -1.37
SHROOM1Q2M3G4 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.47□□□□□ -1.37
SHROOM1Q2M3G4 AC137627.1-201ENST00000545761 289 ntBASIC6.47□□□□□ -1.37
SHROOM1Q2M3G4 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.47□□□□□ -1.37
SHROOM1Q2M3G4 AP000769.2-201ENST00000602344 396 ntBASIC6.47□□□□□ -1.37
SHROOM1Q2M3G4 AL133481.2-203ENST00000607558 139 ntBASIC6.47□□□□□ -1.37
SHROOM1Q2M3G4 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.47□□□□□ -1.37
SHROOM1Q2M3G4 AC126915.2-201ENST00000610957 190 ntBASIC6.47□□□□□ -1.37
SHROOM1Q2M3G4 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.47□□□□□ -1.37
SHROOM1Q2M3G4 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SHROOM1Q2M3G4 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.47□□□□□ -1.37
SHROOM1Q2M3G4 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SHROOM1Q2M3G4 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
SHROOM1Q2M3G4 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SHROOM1Q2M3G4 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SHROOM1Q2M3G4 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SHROOM1Q2M3G4 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
SHROOM1Q2M3G4 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SHROOM1Q2M3G4 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
SHROOM1Q2M3G4 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
SHROOM1Q2M3G4 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
SHROOM1Q2M3G4 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.46□□□□□ -1.37
SHROOM1Q2M3G4 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
SHROOM1Q2M3G4 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
SHROOM1Q2M3G4 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.46□□□□□ -1.38
SHROOM1Q2M3G4 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.46□□□□□ -1.38
SHROOM1Q2M3G4 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
SHROOM1Q2M3G4 AL009179.1-201ENST00000406085 265 ntBASIC6.46□□□□□ -1.38
SHROOM1Q2M3G4 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.46□□□□□ -1.38
SHROOM1Q2M3G4 RPL23AP27-201ENST00000415161 451 ntBASIC6.46□□□□□ -1.38
SHROOM1Q2M3G4 AC108075.1-201ENST00000424692 529 ntBASIC6.46□□□□□ -1.38
SHROOM1Q2M3G4 AC073410.1-201ENST00000435125 589 ntBASIC6.46□□□□□ -1.38
SHROOM1Q2M3G4 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.46□□□□□ -1.38
SHROOM1Q2M3G4 RPL12P3-201ENST00000440080 396 ntBASIC6.46□□□□□ -1.38
SHROOM1Q2M3G4 AC105399.1-202ENST00000447303 205 ntBASIC6.46□□□□□ -1.38
SHROOM1Q2M3G4 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.46□□□□□ -1.38
SHROOM1Q2M3G4 RPL15P21-201ENST00000495592 567 ntBASIC6.46□□□□□ -1.38
SHROOM1Q2M3G4 SUMO2P4-201ENST00000504193 276 ntBASIC6.46□□□□□ -1.38
SHROOM1Q2M3G4 AC138409.2-202ENST00000507274 458 ntBASIC6.46□□□□□ -1.38
SHROOM1Q2M3G4 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.46□□□□□ -1.38
SHROOM1Q2M3G4 snoU109.5-201ENST00000516231 132 ntBASIC6.46□□□□□ -1.38
SHROOM1Q2M3G4 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.46□□□□□ -1.38
SHROOM1Q2M3G4 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.46□□□□□ -1.38
SHROOM1Q2M3G4 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.46□□□□□ -1.38
SHROOM1Q2M3G4 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.46□□□□□ -1.38
SHROOM1Q2M3G4 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.46□□□□□ -1.38
SHROOM1Q2M3G4 AC008536.1-201ENST00000602872 669 ntBASIC6.46□□□□□ -1.38
SHROOM1Q2M3G4 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.46□□□□□ -1.38
SHROOM1Q2M3G4 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms