Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.64□□□□□ -1.51
RAE1P78406 MIR2117-201ENST00000516780 80 ntBASIC5.64□□□□□ -1.51
RAE1P78406 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RAE1P78406 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.64□□□□□ -1.51
RAE1P78406 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.64□□□□□ -1.51
RAE1P78406 HNRNPCP1-201ENST00000556181 766 ntBASIC5.64□□□□□ -1.51
RAE1P78406 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.64□□□□□ -1.51
RAE1P78406 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.64□□□□□ -1.51
RAE1P78406 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RAE1P78406 AC092332.1-201ENST00000563684 829 ntBASIC5.64□□□□□ -1.51
RAE1P78406 AC021483.2-201ENST00000567415 758 ntBASIC5.64□□□□□ -1.51
RAE1P78406 MTATP6P24-201ENST00000576835 677 ntBASIC5.64□□□□□ -1.51
RAE1P78406 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.64□□□□□ -1.51
RAE1P78406 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC5.64□□□□□ -1.51
RAE1P78406 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RAE1P78406 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.64□□□□□ -1.51
RAE1P78406 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.64□□□□□ -1.51
RAE1P78406 AC140725.3-201ENST00000616193 880 ntBASIC5.64□□□□□ -1.51
RAE1P78406 BNIP3P41-202ENST00000616656 861 ntBASIC5.64□□□□□ -1.51
RAE1P78406 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.64□□□□□ -1.51
RAE1P78406 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.64□□□□□ -1.51
RAE1P78406 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.64□□□□□ -1.51
RAE1P78406 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.64□□□□□ -1.51
RAE1P78406 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
RAE1P78406 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RAE1P78406 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.64□□□□□ -1.51
RAE1P78406 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
RAE1P78406 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RAE1P78406 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RAE1P78406 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RAE1P78406 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.64□□□□□ -1.51
RAE1P78406 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RAE1P78406 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
RAE1P78406 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
RAE1P78406 AC010401.2-201ENST00000575137 4934 ntBASIC5.63□□□□□ -1.51
RAE1P78406 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RAE1P78406 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.63□□□□□ -1.51
RAE1P78406 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC5.63□□□□□ -1.51
RAE1P78406 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
RAE1P78406 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.63□□□□□ -1.51
RAE1P78406 SELENOWP1-201ENST00000322792 252 ntBASIC5.63□□□□□ -1.51
RAE1P78406 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.63□□□□□ -1.51
RAE1P78406 AL391422.1-201ENST00000402155 436 ntBASIC5.63□□□□□ -1.51
RAE1P78406 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.63□□□□□ -1.51
RAE1P78406 AC017078.1-201ENST00000416146 368 ntBASIC5.63□□□□□ -1.51
RAE1P78406 BTF3P9-201ENST00000418784 283 ntBASIC5.63□□□□□ -1.51
RAE1P78406 RPS4XP5-201ENST00000419038 768 ntBASIC5.63□□□□□ -1.51
RAE1P78406 PTP4A1P7-201ENST00000423476 514 ntBASIC5.63□□□□□ -1.51
RAE1P78406 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.63□□□□□ -1.51
RAE1P78406 AL138787.1-202ENST00000437804 898 ntBASIC5.63□□□□□ -1.51
RAE1P78406 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.63□□□□□ -1.51
RAE1P78406 AC044797.1-201ENST00000445744 679 ntBASIC5.63□□□□□ -1.51
RAE1P78406 AC097463.1-201ENST00000447288 481 ntBASIC5.63□□□□□ -1.51
RAE1P78406 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.63□□□□□ -1.51
RAE1P78406 RSU1P1-201ENST00000453416 441 ntBASIC5.63□□□□□ -1.51
RAE1P78406 FRG2FP-204ENST00000453982 852 ntBASIC5.63□□□□□ -1.51
RAE1P78406 AC023245.1-201ENST00000468501 517 ntBASIC5.63□□□□□ -1.51
RAE1P78406 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RAE1P78406 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.63□□□□□ -1.51
RAE1P78406 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RAE1P78406 AC092349.1-201ENST00000504903 310 ntBASIC5.63□□□□□ -1.51
RAE1P78406 ST13P12-201ENST00000508958 1094 ntBASIC5.63□□□□□ -1.51
RAE1P78406 AC021146.7-201ENST00000509604 775 ntBASIC5.63□□□□□ -1.51
RAE1P78406 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.63□□□□□ -1.51
RAE1P78406 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.63□□□□□ -1.51
RAE1P78406 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.63□□□□□ -1.51
RAE1P78406 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.63□□□□□ -1.51
RAE1P78406 AC034205.1-201ENST00000520621 638 ntBASIC5.63□□□□□ -1.51
RAE1P78406 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.63□□□□□ -1.51
RAE1P78406 AC118942.1-201ENST00000529674 1035 ntBASIC5.63□□□□□ -1.51
RAE1P78406 AC126615.2-201ENST00000553003 515 ntBASIC5.63□□□□□ -1.51
RAE1P78406 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.63□□□□□ -1.51
RAE1P78406 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC5.63□□□□□ -1.51
RAE1P78406 AC104229.1-201ENST00000561364 255 ntBASIC5.63□□□□□ -1.51
RAE1P78406 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.63□□□□□ -1.51
RAE1P78406 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.63□□□□□ -1.51
RAE1P78406 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.63□□□□□ -1.51
RAE1P78406 AL445435.1-201ENST00000604232 665 ntBASIC5.63□□□□□ -1.51
RAE1P78406 AC073137.1-201ENST00000605636 634 ntBASIC5.63□□□□□ -1.51
RAE1P78406 AL021918.2-201ENST00000613415 194 ntBASIC5.63□□□□□ -1.51
RAE1P78406 AL512427.1-201ENST00000618593 349 ntBASIC5.63□□□□□ -1.51
RAE1P78406 AL136228.1-201ENST00000622221 319 ntBASIC5.63□□□□□ -1.51
RAE1P78406 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
RAE1P78406 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.63□□□□□ -1.51
RAE1P78406 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RAE1P78406 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.63□□□□□ -1.51
RAE1P78406 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
RAE1P78406 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.63□□□□□ -1.51
RAE1P78406 AC012254.3-201ENST00000591183 2117 ntBASIC5.63□□□□□ -1.51
RAE1P78406 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RAE1P78406 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.63□□□□□ -1.51
RAE1P78406 AL359715.4-201ENST00000606629 1436 ntBASIC5.63□□□□□ -1.51
RAE1P78406 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC5.63□□□□□ -1.51
RAE1P78406 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RAE1P78406 AC005261.2-201ENST00000593427 4258 ntBASIC5.62□□□□□ -1.51
RAE1P78406 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.62□□□□□ -1.51
RAE1P78406 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RAE1P78406 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.62□□□□□ -1.51
RAE1P78406 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.62□□□□□ -1.51
RAE1P78406 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms