Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.84□□□□□ -1.63
ACTBP60709 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC4.84□□□□□ -1.63
ACTBP60709 AC092332.1-201ENST00000563684 829 ntBASIC4.84□□□□□ -1.63
ACTBP60709 OR1E3-201ENST00000575608 948 ntBASIC4.84□□□□□ -1.63
ACTBP60709 DHFRP1-201ENST00000579682 559 ntBASIC4.84□□□□□ -1.63
ACTBP60709 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.84□□□□□ -1.63
ACTBP60709 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC4.84□□□□□ -1.63
ACTBP60709 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC4.84□□□□□ -1.63
ACTBP60709 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC4.84□□□□□ -1.63
ACTBP60709 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC4.84□□□□□ -1.63
ACTBP60709 AP001052.1-201ENST00000626421 99 ntBASIC4.84□□□□□ -1.63
ACTBP60709 FRG1EP-201ENST00000634469 770 ntBASIC4.84□□□□□ -1.63
ACTBP60709 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
ACTBP60709 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
ACTBP60709 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
ACTBP60709 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.84□□□□□ -1.63
ACTBP60709 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.64
ACTBP60709 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
ACTBP60709 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
ACTBP60709 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
ACTBP60709 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
ACTBP60709 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
ACTBP60709 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.84□□□□□ -1.64
ACTBP60709 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC4.84□□□□□ -1.64
ACTBP60709 AC011755.1-201ENST00000623763 2049 ntBASIC4.84□□□□□ -1.64
ACTBP60709 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
ACTBP60709 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.83□□□□□ -1.64
ACTBP60709 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.83□□□□□ -1.64
ACTBP60709 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
ACTBP60709 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ACTBP60709 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.83□□□□□ -1.64
ACTBP60709 RBPJP7-201ENST00000442803 1447 ntBASIC4.83□□□□□ -1.64
ACTBP60709 RBPJP5-201ENST00000449433 1447 ntBASIC4.83□□□□□ -1.64
ACTBP60709 TET1P1-201ENST00000426627 2301 ntBASIC4.83□□□□□ -1.64
ACTBP60709 TRIM51GP-201ENST00000534741 1350 ntBASIC4.83□□□□□ -1.64
ACTBP60709 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
ACTBP60709 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
ACTBP60709 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ACTBP60709 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
ACTBP60709 MIR130A-201ENST00000385274 89 ntBASIC4.83□□□□□ -1.64
ACTBP60709 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
ACTBP60709 SNORA48.4-201ENST00000391089 134 ntBASIC4.83□□□□□ -1.64
ACTBP60709 GAPDHP15-201ENST00000398586 975 ntBASIC4.83□□□□□ -1.64
ACTBP60709 MIR1275-201ENST00000408770 80 ntBASIC4.83□□□□□ -1.64
ACTBP60709 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC4.83□□□□□ -1.64
ACTBP60709 RIMKLBP2-201ENST00000424737 654 ntBASIC4.83□□□□□ -1.64
ACTBP60709 AL353662.1-201ENST00000439099 327 ntBASIC4.83□□□□□ -1.64
ACTBP60709 RPL6P30-201ENST00000443382 862 ntBASIC4.83□□□□□ -1.64
ACTBP60709 AL445466.1-201ENST00000448432 357 ntBASIC4.83□□□□□ -1.64
ACTBP60709 OR52E3P-201ENST00000452083 936 ntBASIC4.83□□□□□ -1.64
ACTBP60709 AC239798.3-201ENST00000454459 408 ntBASIC4.83□□□□□ -1.64
ACTBP60709 AC118758.1-202ENST00000454719 225 ntBASIC4.83□□□□□ -1.64
ACTBP60709 AC019084.1-201ENST00000457337 432 ntBASIC4.83□□□□□ -1.64
ACTBP60709 AC009963.3-201ENST00000458090 486 ntBASIC4.83□□□□□ -1.64
ACTBP60709 AC092865.4-201ENST00000477936 615 ntBASIC4.83□□□□□ -1.64
ACTBP60709 AC099521.1-201ENST00000482557 334 ntBASIC4.83□□□□□ -1.64
ACTBP60709 AC069304.1-201ENST00000491593 704 ntBASIC4.83□□□□□ -1.64
ACTBP60709 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.83□□□□□ -1.64
ACTBP60709 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ACTBP60709 USP9YP2-201ENST00000504503 1000 ntBASIC4.83□□□□□ -1.64
ACTBP60709 AC122718.2-201ENST00000505325 591 ntBASIC4.83□□□□□ -1.64
ACTBP60709 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC4.83□□□□□ -1.64
ACTBP60709 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC4.83□□□□□ -1.64
ACTBP60709 USP9YP1-201ENST00000513521 1002 ntBASIC4.83□□□□□ -1.64
ACTBP60709 PRMT5P1-201ENST00000514351 598 ntBASIC4.83□□□□□ -1.64
ACTBP60709 IGLV3-24-201ENST00000517477 197 ntBASIC4.83□□□□□ -1.64
ACTBP60709 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC4.83□□□□□ -1.64
ACTBP60709 AC079064.1-201ENST00000528365 362 ntBASIC4.83□□□□□ -1.64
ACTBP60709 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.83□□□□□ -1.64
ACTBP60709 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ACTBP60709 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.83□□□□□ -1.64
ACTBP60709 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.83□□□□□ -1.64
ACTBP60709 RN7SL290P-201ENST00000578661 300 ntBASIC4.83□□□□□ -1.64
ACTBP60709 AC127024.5-201ENST00000580085 462 ntBASIC4.83□□□□□ -1.64
ACTBP60709 AP005262.1-201ENST00000582646 997 ntBASIC4.83□□□□□ -1.64
ACTBP60709 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC4.83□□□□□ -1.64
ACTBP60709 AL359091.2-201ENST00000609303 556 ntBASIC4.83□□□□□ -1.64
ACTBP60709 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC4.83□□□□□ -1.64
ACTBP60709 AL021918.2-201ENST00000613415 194 ntBASIC4.83□□□□□ -1.64
ACTBP60709 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
ACTBP60709 uc_338.7-201ENST00000621834 124 ntBASIC4.83□□□□□ -1.64
ACTBP60709 MIR6806-201ENST00000622141 64 ntBASIC4.83□□□□□ -1.64
ACTBP60709 OR8A1-204ENST00000642111 1145 ntBASIC4.83□□□□□ -1.64
ACTBP60709 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
ACTBP60709 AC104260.2-201ENST00000623551 3497 ntBASIC4.83□□□□□ -1.64
ACTBP60709 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ACTBP60709 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ACTBP60709 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.83□□□□□ -1.64
ACTBP60709 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
ACTBP60709 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.83□□□□□ -1.64
ACTBP60709 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.82□□□□□ -1.64
ACTBP60709 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ACTBP60709 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
ACTBP60709 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ACTBP60709 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
ACTBP60709 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ACTBP60709 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
ACTBP60709 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.82□□□□□ -1.64
ACTBP60709 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ACTBP60709 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms