Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
VSX2P58304 AL162456.1-201ENST00000634535 2006 ntBASIC5.35□□□□□ -1.55
VSX2P58304 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VSX2P58304 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.35□□□□□ -1.55
VSX2P58304 AC005261.6-201ENST00000623072 1387 ntBASIC5.35□□□□□ -1.55
VSX2P58304 GAPDHP24-201ENST00000328713 983 ntBASIC5.35□□□□□ -1.55
VSX2P58304 RNA5SP326-201ENST00000363209 110 ntBASIC5.35□□□□□ -1.55
VSX2P58304 RN7SKP124-201ENST00000364730 341 ntBASIC5.35□□□□□ -1.55
VSX2P58304 RNU1-136P-201ENST00000384181 164 ntBASIC5.35□□□□□ -1.55
VSX2P58304 U3.25-201ENST00000391209 220 ntBASIC5.35□□□□□ -1.55
VSX2P58304 AL121776.1-201ENST00000429337 372 ntBASIC5.35□□□□□ -1.55
VSX2P58304 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.35□□□□□ -1.55
VSX2P58304 KRT8P51-201ENST00000438938 274 ntBASIC5.35□□□□□ -1.55
VSX2P58304 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.35□□□□□ -1.55
VSX2P58304 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.35□□□□□ -1.55
VSX2P58304 AL450023.1-201ENST00000450868 751 ntBASIC5.35□□□□□ -1.55
VSX2P58304 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.35□□□□□ -1.55
VSX2P58304 PDCL3P4-201ENST00000489621 720 ntBASIC5.35□□□□□ -1.55
VSX2P58304 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.35□□□□□ -1.55
VSX2P58304 ASNSP4-201ENST00000511103 447 ntBASIC5.35□□□□□ -1.55
VSX2P58304 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.35□□□□□ -1.55
VSX2P58304 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.35□□□□□ -1.55
VSX2P58304 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.35□□□□□ -1.55
VSX2P58304 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.35□□□□□ -1.55
VSX2P58304 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.35□□□□□ -1.55
VSX2P58304 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.35□□□□□ -1.55
VSX2P58304 AC060780.2-201ENST00000589047 198 ntBASIC5.35□□□□□ -1.55
VSX2P58304 PPATP2-201ENST00000605635 508 ntBASIC5.35□□□□□ -1.55
VSX2P58304 FAM72A-208ENST00000607379 1139 ntBASIC5.35□□□□□ -1.55
VSX2P58304 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.35□□□□□ -1.55
VSX2P58304 MIR6886-201ENST00000619864 61 ntBASIC5.35□□□□□ -1.55
VSX2P58304 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VSX2P58304 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.35□□□□□ -1.55
VSX2P58304 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.35□□□□□ -1.55
VSX2P58304 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VSX2P58304 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.35□□□□□ -1.55
VSX2P58304 AC144833.1-201ENST00000567953 4089 ntBASIC5.35□□□□□ -1.55
VSX2P58304 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
VSX2P58304 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.34□□□□□ -1.55
VSX2P58304 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VSX2P58304 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.34□□□□□ -1.55
VSX2P58304 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VSX2P58304 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
VSX2P58304 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.34□□□□□ -1.55
VSX2P58304 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
VSX2P58304 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VSX2P58304 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.34□□□□□ -1.55
VSX2P58304 UGT2B24P-201ENST00000514441 1597 ntBASIC5.34□□□□□ -1.55
VSX2P58304 MTCO1P11-201ENST00000429111 1528 ntBASIC5.34□□□□□ -1.55
VSX2P58304 AC068870.1-201ENST00000563737 2455 ntBASIC5.34□□□□□ -1.55
VSX2P58304 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VSX2P58304 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.34□□□□□ -1.55
VSX2P58304 AC004076.2-201ENST00000620532 3323 ntBASIC5.34□□□□□ -1.55
VSX2P58304 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VSX2P58304 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.34□□□□□ -1.55
VSX2P58304 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.34□□□□□ -1.55
VSX2P58304 RN7SKP28-201ENST00000364770 305 ntBASIC5.34□□□□□ -1.55
VSX2P58304 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VSX2P58304 RN7SKP229-201ENST00000410465 302 ntBASIC5.34□□□□□ -1.55
VSX2P58304 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.34□□□□□ -1.55
VSX2P58304 METTL15P3-201ENST00000415522 1221 ntBASIC5.34□□□□□ -1.55
VSX2P58304 AC079355.1-201ENST00000421770 223 ntBASIC5.34□□□□□ -1.55
VSX2P58304 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VSX2P58304 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.34□□□□□ -1.55
VSX2P58304 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.34□□□□□ -1.55
VSX2P58304 AC012075.1-201ENST00000436549 580 ntBASIC5.34□□□□□ -1.55
VSX2P58304 CYCSP51-201ENST00000443545 318 ntBASIC5.34□□□□□ -1.55
VSX2P58304 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.34□□□□□ -1.55
VSX2P58304 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VSX2P58304 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.34□□□□□ -1.55
VSX2P58304 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.34□□□□□ -1.55
VSX2P58304 AC090602.1-201ENST00000469695 252 ntBASIC5.34□□□□□ -1.55
VSX2P58304 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.34□□□□□ -1.55
VSX2P58304 ST13P12-201ENST00000508958 1094 ntBASIC5.34□□□□□ -1.55
VSX2P58304 SCARNA21.2-201ENST00000516600 166 ntBASIC5.34□□□□□ -1.55
VSX2P58304 NRBF2P4-201ENST00000520874 850 ntBASIC5.34□□□□□ -1.55
VSX2P58304 AC137627.1-201ENST00000545761 289 ntBASIC5.34□□□□□ -1.55
VSX2P58304 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.34□□□□□ -1.55
VSX2P58304 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.34□□□□□ -1.55
VSX2P58304 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.34□□□□□ -1.55
VSX2P58304 AC109309.2-201ENST00000612597 332 ntBASIC5.34□□□□□ -1.55
VSX2P58304 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VSX2P58304 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VSX2P58304 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
VSX2P58304 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VSX2P58304 AL449283.1-201ENST00000602631 3403 ntBASIC5.34□□□□□ -1.55
VSX2P58304 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VSX2P58304 AC104964.3-201ENST00000606115 2860 ntBASIC5.34□□□□□ -1.56
VSX2P58304 AL138820.1-201ENST00000617901 5305 ntBASIC5.33□□□□□ -1.56
VSX2P58304 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.33□□□□□ -1.56
VSX2P58304 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.33□□□□□ -1.56
VSX2P58304 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VSX2P58304 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VSX2P58304 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VSX2P58304 AL158152.1-201ENST00000602652 1435 ntBASIC5.33□□□□□ -1.56
VSX2P58304 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VSX2P58304 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VSX2P58304 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.33□□□□□ -1.56
VSX2P58304 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.33□□□□□ -1.56
VSX2P58304 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms