Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC5.55□□□□□ -1.52
CDH13P55290 OR13C3-201ENST00000374781 1108 ntBASIC5.55□□□□□ -1.52
CDH13P55290 RNU6-152P-201ENST00000384037 107 ntBASIC5.55□□□□□ -1.52
CDH13P55290 AMZ2P2-201ENST00000406819 1057 ntBASIC5.55□□□□□ -1.52
CDH13P55290 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.55□□□□□ -1.52
CDH13P55290 EEF1B2P8-201ENST00000414101 671 ntBASIC5.55□□□□□ -1.52
CDH13P55290 BX284632.2-201ENST00000421091 399 ntBASIC5.55□□□□□ -1.52
CDH13P55290 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.55□□□□□ -1.52
CDH13P55290 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.55□□□□□ -1.52
CDH13P55290 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.55□□□□□ -1.52
CDH13P55290 AC126120.1-201ENST00000431082 470 ntBASIC5.55□□□□□ -1.52
CDH13P55290 AL512605.1-202ENST00000441919 381 ntBASIC5.55□□□□□ -1.52
CDH13P55290 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.55□□□□□ -1.52
CDH13P55290 AL359955.2-201ENST00000445380 353 ntBASIC5.55□□□□□ -1.52
CDH13P55290 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.55□□□□□ -1.52
CDH13P55290 AL500527.1-201ENST00000448532 255 ntBASIC5.55□□□□□ -1.52
CDH13P55290 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.55□□□□□ -1.52
CDH13P55290 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDH13P55290 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.55□□□□□ -1.52
CDH13P55290 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.55□□□□□ -1.52
CDH13P55290 RPL32P33-201ENST00000487023 394 ntBASIC5.55□□□□□ -1.52
CDH13P55290 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.55□□□□□ -1.52
CDH13P55290 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.55□□□□□ -1.52
CDH13P55290 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.55□□□□□ -1.52
CDH13P55290 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.55□□□□□ -1.52
CDH13P55290 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.55□□□□□ -1.52
CDH13P55290 AC084121.1-201ENST00000533882 835 ntBASIC5.55□□□□□ -1.52
CDH13P55290 AP001804.2-201ENST00000533932 910 ntBASIC5.55□□□□□ -1.52
CDH13P55290 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.55□□□□□ -1.52
CDH13P55290 AC007956.1-201ENST00000555623 542 ntBASIC5.55□□□□□ -1.52
CDH13P55290 AL845552.1-201ENST00000556820 323 ntBASIC5.55□□□□□ -1.52
CDH13P55290 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.55□□□□□ -1.52
CDH13P55290 AGGF1P7-201ENST00000562369 913 ntBASIC5.55□□□□□ -1.52
CDH13P55290 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.55□□□□□ -1.52
CDH13P55290 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.55□□□□□ -1.52
CDH13P55290 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.55□□□□□ -1.52
CDH13P55290 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.55□□□□□ -1.52
CDH13P55290 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.55□□□□□ -1.52
CDH13P55290 AC067838.1-201ENST00000606064 577 ntBASIC5.55□□□□□ -1.52
CDH13P55290 AC012213.4-201ENST00000606457 354 ntBASIC5.55□□□□□ -1.52
CDH13P55290 AL022394.1-201ENST00000606979 292 ntBASIC5.55□□□□□ -1.52
CDH13P55290 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.55□□□□□ -1.52
CDH13P55290 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.55□□□□□ -1.52
CDH13P55290 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CDH13P55290 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.55□□□□□ -1.52
CDH13P55290 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDH13P55290 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDH13P55290 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDH13P55290 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CDH13P55290 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.55□□□□□ -1.52
CDH13P55290 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.55□□□□□ -1.52
CDH13P55290 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.55□□□□□ -1.52
CDH13P55290 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDH13P55290 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.54□□□□□ -1.52
CDH13P55290 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH13P55290 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CDH13P55290 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH13P55290 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.54□□□□□ -1.52
CDH13P55290 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH13P55290 ABCC13-202ENST00000463099 3842 ntBASIC5.54□□□□□ -1.52
CDH13P55290 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.54□□□□□ -1.52
CDH13P55290 AP000473.2-201ENST00000602659 1537 ntBASIC5.54□□□□□ -1.52
CDH13P55290 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CDH13P55290 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CDH13P55290 AC007938.2-201ENST00000604666 2634 ntBASIC5.54□□□□□ -1.52
CDH13P55290 HSPD1P7-201ENST00000447985 1686 ntBASIC5.54□□□□□ -1.52
CDH13P55290 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH13P55290 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.54□□□□□ -1.52
CDH13P55290 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH13P55290 METTL5-202ENST00000308099 629 ntTSL 3 BASIC5.54□□□□□ -1.52
CDH13P55290 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH13P55290 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.54□□□□□ -1.52
CDH13P55290 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH13P55290 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH13P55290 GABARAPL3-201ENST00000412799 354 ntBASIC5.54□□□□□ -1.52
CDH13P55290 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.54□□□□□ -1.52
CDH13P55290 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.54□□□□□ -1.52
CDH13P55290 NPM1P18-201ENST00000434232 732 ntBASIC5.54□□□□□ -1.52
CDH13P55290 MRPS33P4-201ENST00000434892 317 ntBASIC5.54□□□□□ -1.52
CDH13P55290 AMYP1-201ENST00000440059 1023 ntBASIC5.54□□□□□ -1.52
CDH13P55290 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDH13P55290 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.54□□□□□ -1.52
CDH13P55290 RN7SL197P-201ENST00000466981 299 ntBASIC5.54□□□□□ -1.52
CDH13P55290 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.54□□□□□ -1.52
CDH13P55290 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.54□□□□□ -1.52
CDH13P55290 RNU6-491P-201ENST00000516099 110 ntBASIC5.54□□□□□ -1.52
CDH13P55290 SCARNA18.1-201ENST00000516330 83 ntBASIC5.54□□□□□ -1.52
CDH13P55290 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.54□□□□□ -1.52
CDH13P55290 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.54□□□□□ -1.52
CDH13P55290 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.54□□□□□ -1.52
CDH13P55290 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.54□□□□□ -1.52
CDH13P55290 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.54□□□□□ -1.52
CDH13P55290 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CDH13P55290 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.54□□□□□ -1.52
CDH13P55290 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.54□□□□□ -1.52
CDH13P55290 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.54□□□□□ -1.52
CDH13P55290 AC074029.2-201ENST00000551045 634 ntBASIC5.54□□□□□ -1.52
CDH13P55290 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDH13P55290 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.54□□□□□ -1.52
CDH13P55290 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms