Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.16□□□□□ -1.42
VCPP55072 AC068870.2-201ENST00000620635 389 ntBASIC6.16□□□□□ -1.42
VCPP55072 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
VCPP55072 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VCPP55072 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VCPP55072 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VCPP55072 CDY11P-201ENST00000447168 1651 ntBASIC6.16□□□□□ -1.42
VCPP55072 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.16□□□□□ -1.42
VCPP55072 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.16□□□□□ -1.42
VCPP55072 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
VCPP55072 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
VCPP55072 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
VCPP55072 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
VCPP55072 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
VCPP55072 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
VCPP55072 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
VCPP55072 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.15□□□□□ -1.42
VCPP55072 AC005042.1-201ENST00000393397 800 ntBASIC6.15□□□□□ -1.42
VCPP55072 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
VCPP55072 DPPA2P2-201ENST00000418220 897 ntBASIC6.15□□□□□ -1.42
VCPP55072 TNPO1P1-201ENST00000423641 1138 ntBASIC6.15□□□□□ -1.42
VCPP55072 SRSF1P1-201ENST00000424058 520 ntBASIC6.15□□□□□ -1.42
VCPP55072 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.15□□□□□ -1.42
VCPP55072 RPS12P17-201ENST00000438591 377 ntBASIC6.15□□□□□ -1.42
VCPP55072 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.15□□□□□ -1.42
VCPP55072 RPS7P3-201ENST00000443360 580 ntBASIC6.15□□□□□ -1.42
VCPP55072 RSU1P1-201ENST00000453416 441 ntBASIC6.15□□□□□ -1.42
VCPP55072 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.15□□□□□ -1.42
VCPP55072 AC093166.4-201ENST00000457867 318 ntBASIC6.15□□□□□ -1.42
VCPP55072 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
VCPP55072 AC079080.1-201ENST00000479841 822 ntBASIC6.15□□□□□ -1.42
VCPP55072 RN7SL547P-201ENST00000490793 290 ntBASIC6.15□□□□□ -1.42
VCPP55072 RN7SL57P-201ENST00000493687 290 ntBASIC6.15□□□□□ -1.42
VCPP55072 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.15□□□□□ -1.42
VCPP55072 AC147055.3-201ENST00000510547 851 ntBASIC6.15□□□□□ -1.42
VCPP55072 AL671862.1-201ENST00000515851 349 ntBASIC6.15□□□□□ -1.42
VCPP55072 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.15□□□□□ -1.42
VCPP55072 AC090424.1-201ENST00000535243 736 ntBASIC6.15□□□□□ -1.42
VCPP55072 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC6.15□□□□□ -1.42
VCPP55072 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.15□□□□□ -1.42
VCPP55072 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC6.15□□□□□ -1.42
VCPP55072 AC087565.3-203ENST00000641018 837 ntBASIC6.15□□□□□ -1.42
VCPP55072 CASC19-264ENST00000641912 1184 ntBASIC6.15□□□□□ -1.42
VCPP55072 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
VCPP55072 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
VCPP55072 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
VCPP55072 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
VCPP55072 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.15□□□□□ -1.43
VCPP55072 AC025470.1-201ENST00000510053 2032 ntBASIC6.15□□□□□ -1.43
VCPP55072 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.14□□□□□ -1.43
VCPP55072 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VCPP55072 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VCPP55072 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
VCPP55072 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
VCPP55072 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VCPP55072 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.14□□□□□ -1.43
VCPP55072 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
VCPP55072 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
VCPP55072 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
VCPP55072 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
VCPP55072 RNU6-233P-201ENST00000410845 141 ntBASIC6.14□□□□□ -1.43
VCPP55072 RN7SKP273-201ENST00000411392 314 ntBASIC6.14□□□□□ -1.43
VCPP55072 EIF2S2P3-201ENST00000428356 999 ntBASIC6.14□□□□□ -1.43
VCPP55072 AL390119.1-201ENST00000440329 312 ntBASIC6.14□□□□□ -1.43
VCPP55072 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.14□□□□□ -1.43
VCPP55072 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
VCPP55072 AL161722.1-201ENST00000446972 1032 ntBASIC6.14□□□□□ -1.43
VCPP55072 RPL7P61-201ENST00000451721 751 ntBASIC6.14□□□□□ -1.43
VCPP55072 RPS23P6-201ENST00000466136 431 ntBASIC6.14□□□□□ -1.43
VCPP55072 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC6.14□□□□□ -1.43
VCPP55072 RPL38P3-201ENST00000484463 213 ntBASIC6.14□□□□□ -1.43
VCPP55072 OR51K1P-201ENST00000510214 950 ntBASIC6.14□□□□□ -1.43
VCPP55072 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.14□□□□□ -1.43
VCPP55072 AP000619.2-201ENST00000546014 969 ntBASIC6.14□□□□□ -1.43
VCPP55072 NOP10-202ENST00000557912 436 ntTSL 2 BASIC6.14□□□□□ -1.43
VCPP55072 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.14□□□□□ -1.43
VCPP55072 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.14□□□□□ -1.43
VCPP55072 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC6.14□□□□□ -1.43
VCPP55072 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VCPP55072 AL512329.2-201ENST00000607350 548 ntBASIC6.14□□□□□ -1.43
VCPP55072 RN7SL544P-201ENST00000617232 284 ntBASIC6.14□□□□□ -1.43
VCPP55072 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VCPP55072 RN7SL763P-201ENST00000620922 284 ntBASIC6.14□□□□□ -1.43
VCPP55072 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC6.14□□□□□ -1.43
VCPP55072 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.14□□□□□ -1.43
VCPP55072 OR11H2-202ENST00000641517 1085 ntBASIC6.14□□□□□ -1.43
VCPP55072 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VCPP55072 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
VCPP55072 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
VCPP55072 PDZK1P1-202ENST00000425209 1350 ntBASIC6.14□□□□□ -1.43
VCPP55072 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VCPP55072 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
VCPP55072 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
VCPP55072 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VCPP55072 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VCPP55072 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
VCPP55072 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.14□□□□□ -1.43
VCPP55072 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VCPP55072 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
VCPP55072 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms