Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.31□□□□□ -1.4
HMGCS2P54868 RPA2P2-201ENST00000419698 796 ntBASIC6.31□□□□□ -1.4
HMGCS2P54868 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HMGCS2P54868 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
HMGCS2P54868 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.31□□□□□ -1.4
HMGCS2P54868 USP24P1-201ENST00000433802 779 ntBASIC6.31□□□□□ -1.4
HMGCS2P54868 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.31□□□□□ -1.4
HMGCS2P54868 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.31□□□□□ -1.4
HMGCS2P54868 DNAJB5P1-201ENST00000454004 806 ntBASIC6.31□□□□□ -1.4
HMGCS2P54868 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HMGCS2P54868 AP001922.4-201ENST00000526967 290 ntBASIC6.31□□□□□ -1.4
HMGCS2P54868 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.31□□□□□ -1.4
HMGCS2P54868 AC027667.1-201ENST00000545814 304 ntBASIC6.31□□□□□ -1.4
HMGCS2P54868 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC6.31□□□□□ -1.4
HMGCS2P54868 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.31□□□□□ -1.4
HMGCS2P54868 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC6.31□□□□□ -1.4
HMGCS2P54868 AC095055.1-201ENST00000603472 1113 ntBASIC6.31□□□□□ -1.4
HMGCS2P54868 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC6.31□□□□□ -1.4
HMGCS2P54868 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.31□□□□□ -1.4
HMGCS2P54868 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HMGCS2P54868 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.31□□□□□ -1.4
HMGCS2P54868 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
HMGCS2P54868 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HMGCS2P54868 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
HMGCS2P54868 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HMGCS2P54868 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HMGCS2P54868 CASC19-281ENST00000642118 1554 ntBASIC6.31□□□□□ -1.4
HMGCS2P54868 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HMGCS2P54868 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.31□□□□□ -1.4
HMGCS2P54868 AP000866.6-201ENST00000638898 3579 ntBASIC6.31□□□□□ -1.4
HMGCS2P54868 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
HMGCS2P54868 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.3□□□□□ -1.4
HMGCS2P54868 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
HMGCS2P54868 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HMGCS2P54868 SNORA17.1-201ENST00000362945 126 ntBASIC6.3□□□□□ -1.4
HMGCS2P54868 RNU1-136P-201ENST00000384181 164 ntBASIC6.3□□□□□ -1.4
HMGCS2P54868 RPL23AP17-201ENST00000401064 499 ntBASIC6.3□□□□□ -1.4
HMGCS2P54868 RN7SKP126-201ENST00000411143 300 ntBASIC6.3□□□□□ -1.4
HMGCS2P54868 RBMY2QP-201ENST00000429799 1147 ntBASIC6.3□□□□□ -1.4
HMGCS2P54868 FABP7P2-201ENST00000429946 379 ntBASIC6.3□□□□□ -1.4
HMGCS2P54868 RPS11P7-201ENST00000442125 465 ntBASIC6.3□□□□□ -1.4
HMGCS2P54868 H2AFZP6-201ENST00000444403 394 ntBASIC6.3□□□□□ -1.4
HMGCS2P54868 AL451063.1-201ENST00000450164 1133 ntBASIC6.3□□□□□ -1.4
HMGCS2P54868 ATP5LP5-201ENST00000483050 299 ntBASIC6.3□□□□□ -1.4
HMGCS2P54868 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.3□□□□□ -1.4
HMGCS2P54868 AC013701.1-201ENST00000522657 465 ntBASIC6.3□□□□□ -1.4
HMGCS2P54868 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.3□□□□□ -1.4
HMGCS2P54868 AC011840.5-201ENST00000582125 771 ntBASIC6.3□□□□□ -1.4
HMGCS2P54868 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC6.3□□□□□ -1.4
HMGCS2P54868 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.3□□□□□ -1.4
HMGCS2P54868 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.3□□□□□ -1.4
HMGCS2P54868 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.3□□□□□ -1.4
HMGCS2P54868 AC099654.11-201ENST00000638857 294 ntBASIC6.3□□□□□ -1.4
HMGCS2P54868 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
HMGCS2P54868 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HMGCS2P54868 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HMGCS2P54868 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
HMGCS2P54868 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
HMGCS2P54868 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HMGCS2P54868 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
HMGCS2P54868 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.3□□□□□ -1.4
HMGCS2P54868 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.3□□□□□ -1.4
HMGCS2P54868 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HMGCS2P54868 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
HMGCS2P54868 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.29□□□□□ -1.4
HMGCS2P54868 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.29□□□□□ -1.4
HMGCS2P54868 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMGCS2P54868 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMGCS2P54868 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.29□□□□□ -1.4
HMGCS2P54868 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
HMGCS2P54868 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.29□□□□□ -1.4
HMGCS2P54868 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
HMGCS2P54868 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
HMGCS2P54868 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMGCS2P54868 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HMGCS2P54868 RPL11P3-201ENST00000395256 523 ntBASIC6.29□□□□□ -1.4
HMGCS2P54868 NIPA2P1-201ENST00000426223 976 ntBASIC6.29□□□□□ -1.4
HMGCS2P54868 BRD7P6-201ENST00000431406 1860 ntBASIC6.29□□□□□ -1.4
HMGCS2P54868 AC092647.3-201ENST00000443044 633 ntBASIC6.29□□□□□ -1.4
HMGCS2P54868 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.29□□□□□ -1.4
HMGCS2P54868 GAPDHP25-201ENST00000447061 1001 ntBASIC6.29□□□□□ -1.4
HMGCS2P54868 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HMGCS2P54868 HIGD1AP8-201ENST00000453927 274 ntBASIC6.29□□□□□ -1.4
HMGCS2P54868 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.29□□□□□ -1.4
HMGCS2P54868 AC009127.1-201ENST00000467090 155 ntBASIC6.29□□□□□ -1.4
HMGCS2P54868 RPS4XP20-201ENST00000505751 772 ntBASIC6.29□□□□□ -1.4
HMGCS2P54868 RNA5SP373-201ENST00000517271 95 ntBASIC6.29□□□□□ -1.4
HMGCS2P54868 OR5AM1P-201ENST00000532136 1032 ntBASIC6.29□□□□□ -1.4
HMGCS2P54868 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC6.29□□□□□ -1.4
HMGCS2P54868 AC005341.1-201ENST00000571086 708 ntBASIC6.29□□□□□ -1.4
HMGCS2P54868 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6.29□□□□□ -1.4
HMGCS2P54868 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.29□□□□□ -1.4
HMGCS2P54868 MIR6820-201ENST00000611508 62 ntBASIC6.29□□□□□ -1.4
HMGCS2P54868 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
HMGCS2P54868 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMGCS2P54868 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
HMGCS2P54868 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HMGCS2P54868 AC104964.3-201ENST00000606115 2860 ntBASIC6.29□□□□□ -1.4
HMGCS2P54868 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
HMGCS2P54868 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms