Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.86□□□□□ -1.47
LIMK1P53667 AC011270.1-201ENST00000558606 583 ntBASIC5.86□□□□□ -1.47
LIMK1P53667 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.86□□□□□ -1.47
LIMK1P53667 AC122134.1-201ENST00000565664 1104 ntBASIC5.86□□□□□ -1.47
LIMK1P53667 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.86□□□□□ -1.47
LIMK1P53667 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.86□□□□□ -1.47
LIMK1P53667 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.86□□□□□ -1.47
LIMK1P53667 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.86□□□□□ -1.47
LIMK1P53667 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
LIMK1P53667 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LIMK1P53667 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.86□□□□□ -1.47
LIMK1P53667 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LIMK1P53667 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.86□□□□□ -1.47
LIMK1P53667 AC005725.1-201ENST00000577346 2607 ntBASIC5.86□□□□□ -1.47
LIMK1P53667 AC007938.2-201ENST00000604666 2634 ntBASIC5.86□□□□□ -1.47
LIMK1P53667 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.86□□□□□ -1.47
LIMK1P53667 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
LIMK1P53667 AL161756.3-201ENST00000641216 2071 ntBASIC5.86□□□□□ -1.47
LIMK1P53667 AL022323.4-201ENST00000623980 13120 ntBASIC5.86□□□□□ -1.47
LIMK1P53667 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.86□□□□□ -1.47
LIMK1P53667 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LIMK1P53667 AC093775.1-201ENST00000624154 1868 ntBASIC5.85□□□□□ -1.47
LIMK1P53667 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.85□□□□□ -1.47
LIMK1P53667 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LIMK1P53667 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
LIMK1P53667 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
LIMK1P53667 AC010266.2-201ENST00000564741 3255 ntBASIC5.85□□□□□ -1.47
LIMK1P53667 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.85□□□□□ -1.47
LIMK1P53667 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
LIMK1P53667 AC027228.2-201ENST00000567141 2154 ntBASIC5.85□□□□□ -1.47
LIMK1P53667 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
LIMK1P53667 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LIMK1P53667 RNU6-1331P-201ENST00000363658 106 ntBASIC5.85□□□□□ -1.47
LIMK1P53667 RNU6-891P-201ENST00000384280 111 ntBASIC5.85□□□□□ -1.47
LIMK1P53667 RNU6-1263P-201ENST00000384601 106 ntBASIC5.85□□□□□ -1.47
LIMK1P53667 AC096644.3-201ENST00000416788 338 ntBASIC5.85□□□□□ -1.47
LIMK1P53667 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LIMK1P53667 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC5.85□□□□□ -1.47
LIMK1P53667 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.85□□□□□ -1.47
LIMK1P53667 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.85□□□□□ -1.47
LIMK1P53667 AC092651.1-201ENST00000426110 312 ntBASIC5.85□□□□□ -1.47
LIMK1P53667 AL022331.1-201ENST00000429025 477 ntBASIC5.85□□□□□ -1.47
LIMK1P53667 AC012075.1-201ENST00000436549 580 ntBASIC5.85□□□□□ -1.47
LIMK1P53667 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.85□□□□□ -1.47
LIMK1P53667 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.85□□□□□ -1.47
LIMK1P53667 snoU13.29-201ENST00000459370 104 ntBASIC5.85□□□□□ -1.47
LIMK1P53667 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.85□□□□□ -1.47
LIMK1P53667 CBX1P5-201ENST00000475330 559 ntBASIC5.85□□□□□ -1.47
LIMK1P53667 RN7SL583P-201ENST00000475692 287 ntBASIC5.85□□□□□ -1.47
LIMK1P53667 AL035690.1-201ENST00000490892 383 ntBASIC5.85□□□□□ -1.47
LIMK1P53667 OR9N1P-201ENST00000491296 333 ntBASIC5.85□□□□□ -1.47
LIMK1P53667 AC083795.1-201ENST00000491760 320 ntBASIC5.85□□□□□ -1.47
LIMK1P53667 AC024558.1-201ENST00000505008 528 ntBASIC5.85□□□□□ -1.47
LIMK1P53667 ST13P12-201ENST00000508958 1094 ntBASIC5.85□□□□□ -1.47
LIMK1P53667 AC147055.3-201ENST00000510547 851 ntBASIC5.85□□□□□ -1.47
LIMK1P53667 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.85□□□□□ -1.47
LIMK1P53667 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.85□□□□□ -1.47
LIMK1P53667 SNORA48.9-201ENST00000516419 162 ntBASIC5.85□□□□□ -1.47
LIMK1P53667 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.85□□□□□ -1.47
LIMK1P53667 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.85□□□□□ -1.47
LIMK1P53667 OR56A7P-201ENST00000524865 941 ntBASIC5.85□□□□□ -1.47
LIMK1P53667 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.85□□□□□ -1.47
LIMK1P53667 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.85□□□□□ -1.47
LIMK1P53667 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.85□□□□□ -1.47
LIMK1P53667 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.85□□□□□ -1.47
LIMK1P53667 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LIMK1P53667 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.85□□□□□ -1.47
LIMK1P53667 SNORD39.2-201ENST00000579995 76 ntBASIC5.85□□□□□ -1.47
LIMK1P53667 RN7SL708P-201ENST00000580952 299 ntBASIC5.85□□□□□ -1.47
LIMK1P53667 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.85□□□□□ -1.47
LIMK1P53667 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.85□□□□□ -1.47
LIMK1P53667 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.85□□□□□ -1.47
LIMK1P53667 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.85□□□□□ -1.47
LIMK1P53667 AC008115.3-201ENST00000614874 549 ntBASIC5.85□□□□□ -1.47
LIMK1P53667 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC5.85□□□□□ -1.47
LIMK1P53667 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.85□□□□□ -1.47
LIMK1P53667 AP001153.1-201ENST00000641024 338 ntBASIC5.85□□□□□ -1.47
LIMK1P53667 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.85□□□□□ -1.47
LIMK1P53667 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LIMK1P53667 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.85□□□□□ -1.47
LIMK1P53667 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LIMK1P53667 AC023421.1-201ENST00000590535 1785 ntBASIC5.85□□□□□ -1.47
LIMK1P53667 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
LIMK1P53667 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
LIMK1P53667 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
LIMK1P53667 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
LIMK1P53667 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC5.85□□□□□ -1.47
LIMK1P53667 AC019072.1-201ENST00000604535 1551 ntBASIC5.84□□□□□ -1.47
LIMK1P53667 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
LIMK1P53667 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.84□□□□□ -1.47
LIMK1P53667 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LIMK1P53667 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC5.84□□□□□ -1.47
LIMK1P53667 AC092692.1-201ENST00000623625 2595 ntBASIC5.84□□□□□ -1.47
LIMK1P53667 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.84□□□□□ -1.47
LIMK1P53667 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
LIMK1P53667 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LIMK1P53667 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.84□□□□□ -1.47
LIMK1P53667 RNU6-386P-201ENST00000362650 107 ntBASIC5.84□□□□□ -1.47
LIMK1P53667 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
LIMK1P53667 AL445238.1-204ENST00000400311 463 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms