Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COPAP53621 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.24□□□□□ -1.41
COPAP53621 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.24□□□□□ -1.41
COPAP53621 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6.24□□□□□ -1.41
COPAP53621 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COPAP53621 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
COPAP53621 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
COPAP53621 UGT2B24P-201ENST00000514441 1597 ntBASIC6.23□□□□□ -1.41
COPAP53621 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
COPAP53621 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
COPAP53621 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.23□□□□□ -1.41
COPAP53621 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.23□□□□□ -1.41
COPAP53621 SAMM50P1-201ENST00000455403 1399 ntBASIC6.23□□□□□ -1.41
COPAP53621 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
COPAP53621 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
COPAP53621 RNA5SP478-201ENST00000364657 115 ntBASIC6.23□□□□□ -1.41
COPAP53621 RNA5SP510-201ENST00000364697 99 ntBASIC6.23□□□□□ -1.41
COPAP53621 SNORA72.3-201ENST00000365074 132 ntBASIC6.23□□□□□ -1.41
COPAP53621 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COPAP53621 AL031985.1-201ENST00000392713 418 ntBASIC6.23□□□□□ -1.41
COPAP53621 AL445238.1-204ENST00000400311 463 ntBASIC6.23□□□□□ -1.41
COPAP53621 AL096800.1-201ENST00000405326 893 ntBASIC6.23□□□□□ -1.41
COPAP53621 AL353692.2-201ENST00000407054 335 ntBASIC6.23□□□□□ -1.41
COPAP53621 RANP4-201ENST00000413361 655 ntBASIC6.23□□□□□ -1.41
COPAP53621 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.23□□□□□ -1.41
COPAP53621 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC6.23□□□□□ -1.41
COPAP53621 RPL23AP19-201ENST00000436229 369 ntBASIC6.23□□□□□ -1.41
COPAP53621 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.23□□□□□ -1.41
COPAP53621 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC6.23□□□□□ -1.41
COPAP53621 RPL7L1P3-201ENST00000455249 689 ntBASIC6.23□□□□□ -1.41
COPAP53621 AL445687.2-201ENST00000458156 728 ntBASIC6.23□□□□□ -1.41
COPAP53621 snoU13.29-201ENST00000459370 104 ntBASIC6.23□□□□□ -1.41
COPAP53621 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.23□□□□□ -1.41
COPAP53621 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.23□□□□□ -1.41
COPAP53621 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COPAP53621 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC6.23□□□□□ -1.41
COPAP53621 RNU6-415P-201ENST00000516252 97 ntBASIC6.23□□□□□ -1.41
COPAP53621 AC022826.1-201ENST00000519383 805 ntBASIC6.23□□□□□ -1.41
COPAP53621 NOP56P3-201ENST00000549457 385 ntBASIC6.23□□□□□ -1.41
COPAP53621 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.23□□□□□ -1.41
COPAP53621 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.23□□□□□ -1.41
COPAP53621 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.23□□□□□ -1.41
COPAP53621 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.23□□□□□ -1.41
COPAP53621 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.23□□□□□ -1.41
COPAP53621 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.23□□□□□ -1.41
COPAP53621 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.23□□□□□ -1.41
COPAP53621 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.23□□□□□ -1.41
COPAP53621 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.23□□□□□ -1.41
COPAP53621 AC090236.2-201ENST00000587933 1101 ntBASIC6.23□□□□□ -1.41
COPAP53621 AC006116.7-201ENST00000590141 756 ntBASIC6.23□□□□□ -1.41
COPAP53621 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.23□□□□□ -1.41
COPAP53621 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.23□□□□□ -1.41
COPAP53621 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.23□□□□□ -1.41
COPAP53621 AP001267.4-201ENST00000602598 545 ntBASIC6.23□□□□□ -1.41
COPAP53621 AC004775.1-201ENST00000607389 753 ntBASIC6.23□□□□□ -1.41
COPAP53621 AC034229.4-201ENST00000607861 441 ntBASIC6.23□□□□□ -1.41
COPAP53621 MKKS-203ENST00000609375 882 ntTSL 2 BASIC6.23□□□□□ -1.41
COPAP53621 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.23□□□□□ -1.41
COPAP53621 AC245389.2-201ENST00000616023 576 ntBASIC6.23□□□□□ -1.41
COPAP53621 AC242843.1-201ENST00000618702 573 ntBASIC6.23□□□□□ -1.41
COPAP53621 AC019080.5-201ENST00000624891 757 ntBASIC6.23□□□□□ -1.41
COPAP53621 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.23□□□□□ -1.41
COPAP53621 AP001153.1-201ENST00000641024 338 ntBASIC6.23□□□□□ -1.41
COPAP53621 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.23□□□□□ -1.41
COPAP53621 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.23□□□□□ -1.41
COPAP53621 HSPA8P19-201ENST00000505359 1517 ntBASIC6.23□□□□□ -1.41
COPAP53621 KARSP1-201ENST00000451871 1752 ntBASIC6.23□□□□□ -1.41
COPAP53621 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
COPAP53621 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COPAP53621 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
COPAP53621 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COPAP53621 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.22□□□□□ -1.41
COPAP53621 AC092692.1-201ENST00000623625 2595 ntBASIC6.22□□□□□ -1.41
COPAP53621 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.22□□□□□ -1.41
COPAP53621 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COPAP53621 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.22□□□□□ -1.41
COPAP53621 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.22□□□□□ -1.41
COPAP53621 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.22□□□□□ -1.41
COPAP53621 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.22□□□□□ -1.41
COPAP53621 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.22□□□□□ -1.41
COPAP53621 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.22□□□□□ -1.41
COPAP53621 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COPAP53621 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COPAP53621 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
COPAP53621 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
COPAP53621 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COPAP53621 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
COPAP53621 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COPAP53621 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.22□□□□□ -1.41
COPAP53621 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
COPAP53621 AL096711.1-201ENST00000404780 554 ntBASIC6.22□□□□□ -1.41
COPAP53621 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.22□□□□□ -1.41
COPAP53621 RPL35AP31-201ENST00000418340 337 ntBASIC6.22□□□□□ -1.41
COPAP53621 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC6.22□□□□□ -1.41
COPAP53621 MORF4L1P7-201ENST00000426038 703 ntBASIC6.22□□□□□ -1.41
COPAP53621 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC6.22□□□□□ -1.41
COPAP53621 AL391987.1-201ENST00000441025 200 ntBASIC6.22□□□□□ -1.41
COPAP53621 GAPDHP23-201ENST00000444823 993 ntBASIC6.22□□□□□ -1.41
COPAP53621 FTLP8-201ENST00000446770 267 ntBASIC6.22□□□□□ -1.41
COPAP53621 AL627224.1-201ENST00000448334 444 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms