Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.16□□□□□ -1.42
HOXD13P35453 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.16□□□□□ -1.42
HOXD13P35453 MIR3614-201ENST00000581261 86 ntBASIC6.16□□□□□ -1.42
HOXD13P35453 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.16□□□□□ -1.42
HOXD13P35453 AC015982.1-201ENST00000608113 465 ntBASIC6.16□□□□□ -1.42
HOXD13P35453 AC084036.1-201ENST00000609190 508 ntBASIC6.16□□□□□ -1.42
HOXD13P35453 AL158062.1-201ENST00000619632 745 ntBASIC6.16□□□□□ -1.42
HOXD13P35453 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.16□□□□□ -1.42
HOXD13P35453 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXD13P35453 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HOXD13P35453 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXD13P35453 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
HOXD13P35453 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXD13P35453 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.15□□□□□ -1.42
HOXD13P35453 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HOXD13P35453 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
HOXD13P35453 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.15□□□□□ -1.42
HOXD13P35453 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.15□□□□□ -1.42
HOXD13P35453 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.15□□□□□ -1.42
HOXD13P35453 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HOXD13P35453 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.15□□□□□ -1.42
HOXD13P35453 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
HOXD13P35453 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HOXD13P35453 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.15□□□□□ -1.42
HOXD13P35453 AL672167.2-201ENST00000377164 879 ntBASIC6.15□□□□□ -1.42
HOXD13P35453 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.15□□□□□ -1.42
HOXD13P35453 RNA5SP284-201ENST00000384547 118 ntBASIC6.15□□□□□ -1.42
HOXD13P35453 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
HOXD13P35453 GABARAPL3-201ENST00000412799 354 ntBASIC6.15□□□□□ -1.42
HOXD13P35453 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.15□□□□□ -1.42
HOXD13P35453 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.15□□□□□ -1.42
HOXD13P35453 AC099670.2-201ENST00000435130 321 ntBASIC6.15□□□□□ -1.42
HOXD13P35453 ARL5AP3-201ENST00000439327 386 ntBASIC6.15□□□□□ -1.42
HOXD13P35453 AP000281.1-201ENST00000444036 316 ntBASIC6.15□□□□□ -1.42
HOXD13P35453 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.15□□□□□ -1.42
HOXD13P35453 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.15□□□□□ -1.42
HOXD13P35453 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.15□□□□□ -1.42
HOXD13P35453 AL450023.1-201ENST00000450868 751 ntBASIC6.15□□□□□ -1.42
HOXD13P35453 LRRC37A14P-201ENST00000452297 462 ntBASIC6.15□□□□□ -1.42
HOXD13P35453 AZGP1P2-201ENST00000454506 345 ntBASIC6.15□□□□□ -1.42
HOXD13P35453 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.15□□□□□ -1.42
HOXD13P35453 AC087672.1-201ENST00000479876 766 ntBASIC6.15□□□□□ -1.42
HOXD13P35453 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.15□□□□□ -1.42
HOXD13P35453 AC138866.2-201ENST00000508650 584 ntBASIC6.15□□□□□ -1.42
HOXD13P35453 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
HOXD13P35453 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.15□□□□□ -1.42
HOXD13P35453 AC026616.1-201ENST00000523157 525 ntBASIC6.15□□□□□ -1.42
HOXD13P35453 AC122688.1-201ENST00000541494 223 ntBASIC6.15□□□□□ -1.42
HOXD13P35453 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.15□□□□□ -1.42
HOXD13P35453 AP001496.3-201ENST00000580230 913 ntBASIC6.15□□□□□ -1.42
HOXD13P35453 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.15□□□□□ -1.42
HOXD13P35453 AL583832.1-201ENST00000603227 784 ntBASIC6.15□□□□□ -1.42
HOXD13P35453 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.15□□□□□ -1.42
HOXD13P35453 AL159169.2-201ENST00000610061 1269 ntBASIC6.15□□□□□ -1.42
HOXD13P35453 AC015922.4-201ENST00000612568 690 ntBASIC6.15□□□□□ -1.42
HOXD13P35453 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.15□□□□□ -1.42
HOXD13P35453 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
HOXD13P35453 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
HOXD13P35453 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
HOXD13P35453 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
HOXD13P35453 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.15□□□□□ -1.43
HOXD13P35453 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.15□□□□□ -1.43
HOXD13P35453 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
HOXD13P35453 AL356317.1-201ENST00000396110 1436 ntBASIC6.15□□□□□ -1.43
HOXD13P35453 PROS2P-201ENST00000474651 1951 ntBASIC6.15□□□□□ -1.43
HOXD13P35453 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.15□□□□□ -1.43
HOXD13P35453 OR4F13P-202ENST00000560066 2054 ntBASIC6.14□□□□□ -1.43
HOXD13P35453 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
HOXD13P35453 YES1P1-201ENST00000418510 1628 ntBASIC6.14□□□□□ -1.43
HOXD13P35453 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HOXD13P35453 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
HOXD13P35453 AL022323.4-201ENST00000623980 13120 ntBASIC6.14□□□□□ -1.43
HOXD13P35453 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXD13P35453 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXD13P35453 AC023490.2-201ENST00000359859 470 ntBASIC6.14□□□□□ -1.43
HOXD13P35453 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
HOXD13P35453 AL136116.2-201ENST00000404020 785 ntBASIC6.14□□□□□ -1.43
HOXD13P35453 RMRPP5-201ENST00000411156 267 ntBASIC6.14□□□□□ -1.43
HOXD13P35453 BMS1P17-202ENST00000416720 316 ntBASIC6.14□□□□□ -1.43
HOXD13P35453 AKR1B10P1-201ENST00000425765 942 ntBASIC6.14□□□□□ -1.43
HOXD13P35453 AC113412.1-201ENST00000425840 504 ntBASIC6.14□□□□□ -1.43
HOXD13P35453 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXD13P35453 PCNPP2-201ENST00000441651 455 ntBASIC6.14□□□□□ -1.43
HOXD13P35453 AC064862.4-201ENST00000442180 334 ntBASIC6.14□□□□□ -1.43
HOXD13P35453 EEF1B2P6-201ENST00000445713 673 ntBASIC6.14□□□□□ -1.43
HOXD13P35453 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.14□□□□□ -1.43
HOXD13P35453 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXD13P35453 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXD13P35453 RN7SL72P-201ENST00000460697 269 ntBASIC6.14□□□□□ -1.43
HOXD13P35453 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC6.14□□□□□ -1.43
HOXD13P35453 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC6.14□□□□□ -1.43
HOXD13P35453 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.14□□□□□ -1.43
HOXD13P35453 CYCSP22-201ENST00000517555 339 ntBASIC6.14□□□□□ -1.43
HOXD13P35453 AC104997.1-201ENST00000519761 717 ntBASIC6.14□□□□□ -1.43
HOXD13P35453 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.14□□□□□ -1.43
HOXD13P35453 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC6.14□□□□□ -1.43
HOXD13P35453 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXD13P35453 AC079600.1-201ENST00000550326 297 ntBASIC6.14□□□□□ -1.43
HOXD13P35453 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXD13P35453 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms