Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RFC4P35249 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RFC4P35249 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RFC4P35249 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.95□□□□□ -1.3
RFC4P35249 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RFC4P35249 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.95□□□□□ -1.3
RFC4P35249 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.95□□□□□ -1.3
RFC4P35249 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.95□□□□□ -1.3
RFC4P35249 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
RFC4P35249 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RFC4P35249 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
RFC4P35249 MIR141-201ENST00000384975 95 ntBASIC6.95□□□□□ -1.3
RFC4P35249 AP003170.5-201ENST00000397185 335 ntBASIC6.95□□□□□ -1.3
RFC4P35249 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.95□□□□□ -1.3
RFC4P35249 FABP12P1-201ENST00000401911 322 ntBASIC6.95□□□□□ -1.3
RFC4P35249 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC6.95□□□□□ -1.3
RFC4P35249 AC211486.3-201ENST00000412694 621 ntBASIC6.95□□□□□ -1.3
RFC4P35249 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.95□□□□□ -1.3
RFC4P35249 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.95□□□□□ -1.3
RFC4P35249 AC073648.4-201ENST00000442655 781 ntBASIC6.95□□□□□ -1.3
RFC4P35249 AC009220.1-201ENST00000451614 275 ntBASIC6.95□□□□□ -1.3
RFC4P35249 RPS3AP41-201ENST00000462701 778 ntBASIC6.95□□□□□ -1.3
RFC4P35249 FTH1P2-201ENST00000466086 412 ntBASIC6.95□□□□□ -1.3
RFC4P35249 RPS7P6-201ENST00000485777 579 ntBASIC6.95□□□□□ -1.3
RFC4P35249 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RFC4P35249 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC6.95□□□□□ -1.3
RFC4P35249 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
RFC4P35249 AC139697.1-201ENST00000548429 745 ntBASIC6.95□□□□□ -1.3
RFC4P35249 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC6.95□□□□□ -1.3
RFC4P35249 MIR4301-201ENST00000577203 66 ntBASIC6.95□□□□□ -1.3
RFC4P35249 PRELID3BP3-201ENST00000584963 545 ntBASIC6.95□□□□□ -1.3
RFC4P35249 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC6.95□□□□□ -1.3
RFC4P35249 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.95□□□□□ -1.3
RFC4P35249 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RFC4P35249 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.95□□□□□ -1.3
RFC4P35249 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
RFC4P35249 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
RFC4P35249 ZNF969P-201ENST00000510345 2341 ntBASIC6.95□□□□□ -1.3
RFC4P35249 AC005224.3-201ENST00000584683 2140 ntBASIC6.95□□□□□ -1.3
RFC4P35249 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.95□□□□□ -1.3
RFC4P35249 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
RFC4P35249 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
RFC4P35249 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
RFC4P35249 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
RFC4P35249 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
RFC4P35249 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
RFC4P35249 RPS21P8-201ENST00000413365 247 ntBASIC6.94□□□□□ -1.3
RFC4P35249 AC007161.1-204ENST00000423039 460 ntBASIC6.94□□□□□ -1.3
RFC4P35249 AC104837.2-201ENST00000427236 424 ntBASIC6.94□□□□□ -1.3
RFC4P35249 AC105233.1-201ENST00000498840 781 ntBASIC6.94□□□□□ -1.3
RFC4P35249 CSNK1A1P3-201ENST00000504105 330 ntBASIC6.94□□□□□ -1.3
RFC4P35249 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC6.94□□□□□ -1.3
RFC4P35249 MTND6P2-201ENST00000512226 524 ntBASIC6.94□□□□□ -1.3
RFC4P35249 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.94□□□□□ -1.3
RFC4P35249 UBE2Q2P10-201ENST00000514854 900 ntBASIC6.94□□□□□ -1.3
RFC4P35249 OR5AZ1P-201ENST00000527448 943 ntBASIC6.94□□□□□ -1.3
RFC4P35249 NOP10-202ENST00000557912 436 ntTSL 2 BASIC6.94□□□□□ -1.3
RFC4P35249 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC6.94□□□□□ -1.3
RFC4P35249 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.94□□□□□ -1.3
RFC4P35249 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.94□□□□□ -1.3
RFC4P35249 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC6.94□□□□□ -1.3
RFC4P35249 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.94□□□□□ -1.3
RFC4P35249 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.94□□□□□ -1.3
RFC4P35249 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.94□□□□□ -1.3
RFC4P35249 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
RFC4P35249 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.94□□□□□ -1.3
RFC4P35249 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.93□□□□□ -1.3
RFC4P35249 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
RFC4P35249 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.93□□□□□ -1.3
RFC4P35249 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.93□□□□□ -1.3
RFC4P35249 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.93□□□□□ -1.3
RFC4P35249 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.93□□□□□ -1.3
RFC4P35249 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.93□□□□□ -1.3
RFC4P35249 AC012618.3-205ENST00000637896 1496 ntBASIC6.93□□□□□ -1.3
RFC4P35249 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RFC4P35249 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RFC4P35249 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.93□□□□□ -1.3
RFC4P35249 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
RFC4P35249 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
RFC4P35249 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
RFC4P35249 SNORA51.8-201ENST00000384234 132 ntBASIC6.93□□□□□ -1.3
RFC4P35249 CYB5AP4-201ENST00000396692 399 ntBASIC6.93□□□□□ -1.3
RFC4P35249 RN7SKP126-201ENST00000411143 300 ntBASIC6.93□□□□□ -1.3
RFC4P35249 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RFC4P35249 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC6.93□□□□□ -1.3
RFC4P35249 AL596266.1-201ENST00000448132 400 ntBASIC6.93□□□□□ -1.3
RFC4P35249 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.93□□□□□ -1.3
RFC4P35249 AC093524.1-201ENST00000564266 1094 ntBASIC6.93□□□□□ -1.3
RFC4P35249 MIR4330-201ENST00000579077 105 ntBASIC6.93□□□□□ -1.3
RFC4P35249 DHFRP1-201ENST00000579682 559 ntBASIC6.93□□□□□ -1.3
RFC4P35249 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC6.93□□□□□ -1.3
RFC4P35249 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.93□□□□□ -1.3
RFC4P35249 AC005084.1-201ENST00000605160 304 ntBASIC6.93□□□□□ -1.3
RFC4P35249 NANOGP3-201ENST00000605855 286 ntBASIC6.93□□□□□ -1.3
RFC4P35249 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RFC4P35249 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.93□□□□□ -1.3
RFC4P35249 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.93□□□□□ -1.3
RFC4P35249 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
RFC4P35249 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.93□□□□□ -1.3
RFC4P35249 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms