Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AP005403.1-201ENST00000579720 229 ntBASIC6.82□□□□□ -1.32
TM4SF1P30408 H3F3BP2-201ENST00000583907 357 ntBASIC6.82□□□□□ -1.32
TM4SF1P30408 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.82□□□□□ -1.32
TM4SF1P30408 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.82□□□□□ -1.32
TM4SF1P30408 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.82□□□□□ -1.32
TM4SF1P30408 AL731566.2-201ENST00000618971 317 ntBASIC6.82□□□□□ -1.32
TM4SF1P30408 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
TM4SF1P30408 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
TM4SF1P30408 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
TM4SF1P30408 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.82□□□□□ -1.32
TM4SF1P30408 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
TM4SF1P30408 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
TM4SF1P30408 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
TM4SF1P30408 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.82□□□□□ -1.32
TM4SF1P30408 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TM4SF1P30408 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
TM4SF1P30408 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TM4SF1P30408 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.81□□□□□ -1.32
TM4SF1P30408 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TM4SF1P30408 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TM4SF1P30408 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
TM4SF1P30408 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.81□□□□□ -1.32
TM4SF1P30408 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
TM4SF1P30408 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TM4SF1P30408 ZNF840P-201ENST00000504759 1996 ntBASIC6.81□□□□□ -1.32
TM4SF1P30408 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TM4SF1P30408 RNA5SP87-201ENST00000384155 118 ntBASIC6.81□□□□□ -1.32
TM4SF1P30408 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.81□□□□□ -1.32
TM4SF1P30408 RN7SKP126-201ENST00000411143 300 ntBASIC6.81□□□□□ -1.32
TM4SF1P30408 RAB28P1-201ENST00000411517 641 ntBASIC6.81□□□□□ -1.32
TM4SF1P30408 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC6.81□□□□□ -1.32
TM4SF1P30408 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
TM4SF1P30408 KATNBL1P2-201ENST00000433311 835 ntBASIC6.81□□□□□ -1.32
TM4SF1P30408 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.81□□□□□ -1.32
TM4SF1P30408 AL451063.1-201ENST00000450164 1133 ntBASIC6.81□□□□□ -1.32
TM4SF1P30408 RSU1P1-201ENST00000453416 441 ntBASIC6.81□□□□□ -1.32
TM4SF1P30408 RPL17P2-201ENST00000491913 451 ntBASIC6.81□□□□□ -1.32
TM4SF1P30408 snoU109.5-201ENST00000516231 132 ntBASIC6.81□□□□□ -1.32
TM4SF1P30408 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC6.81□□□□□ -1.32
TM4SF1P30408 AC005000.1-201ENST00000536192 288 ntBASIC6.81□□□□□ -1.32
TM4SF1P30408 BNIP3P1-201ENST00000547295 580 ntBASIC6.81□□□□□ -1.32
TM4SF1P30408 AC018552.1-201ENST00000562099 811 ntBASIC6.81□□□□□ -1.32
TM4SF1P30408 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.81□□□□□ -1.32
TM4SF1P30408 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.81□□□□□ -1.32
TM4SF1P30408 AC087283.1-201ENST00000604029 1074 ntBASIC6.81□□□□□ -1.32
TM4SF1P30408 AC010435.1-201ENST00000623353 1177 ntBASIC6.81□□□□□ -1.32
TM4SF1P30408 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.81□□□□□ -1.32
TM4SF1P30408 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TM4SF1P30408 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TM4SF1P30408 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
TM4SF1P30408 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.81□□□□□ -1.32
TM4SF1P30408 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
TM4SF1P30408 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TM4SF1P30408 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.81□□□□□ -1.32
TM4SF1P30408 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
TM4SF1P30408 PRNCR1-201ENST00000635449 12727 ntBASIC6.8□□□□□ -1.32
TM4SF1P30408 RNA5SP326-201ENST00000363209 110 ntBASIC6.8□□□□□ -1.32
TM4SF1P30408 SNORD1C-201ENST00000363315 78 ntBASIC6.8□□□□□ -1.32
TM4SF1P30408 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.8□□□□□ -1.32
TM4SF1P30408 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.8□□□□□ -1.32
TM4SF1P30408 TRGV7-201ENST00000427089 353 ntBASIC6.8□□□□□ -1.32
TM4SF1P30408 NPM1P48-201ENST00000436002 853 ntBASIC6.8□□□□□ -1.32
TM4SF1P30408 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC6.8□□□□□ -1.32
TM4SF1P30408 AL157385.1-201ENST00000446973 268 ntBASIC6.8□□□□□ -1.32
TM4SF1P30408 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC6.8□□□□□ -1.32
TM4SF1P30408 AL672167.3-201ENST00000465951 960 ntBASIC6.8□□□□□ -1.32
TM4SF1P30408 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
TM4SF1P30408 RPL37AP8-201ENST00000494116 276 ntBASIC6.8□□□□□ -1.32
TM4SF1P30408 AL671862.1-201ENST00000515851 349 ntBASIC6.8□□□□□ -1.32
TM4SF1P30408 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC6.8□□□□□ -1.32
TM4SF1P30408 AC022784.5-201ENST00000522241 437 ntBASIC6.8□□□□□ -1.32
TM4SF1P30408 PMS2P3-207ENST00000529061 717 ntBASIC6.8□□□□□ -1.32
TM4SF1P30408 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.8□□□□□ -1.32
TM4SF1P30408 AC134349.2-201ENST00000535136 910 ntBASIC6.8□□□□□ -1.32
TM4SF1P30408 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
TM4SF1P30408 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC6.8□□□□□ -1.32
TM4SF1P30408 AL513327.3-201ENST00000602618 469 ntBASIC6.8□□□□□ -1.32
TM4SF1P30408 HIRAP1-201ENST00000605318 787 ntBASIC6.8□□□□□ -1.32
TM4SF1P30408 MIR378J-201ENST00000611988 109 ntBASIC6.8□□□□□ -1.32
TM4SF1P30408 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
TM4SF1P30408 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
TM4SF1P30408 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
TM4SF1P30408 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.8□□□□□ -1.32
TM4SF1P30408 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.8□□□□□ -1.32
TM4SF1P30408 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
TM4SF1P30408 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
TM4SF1P30408 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.8□□□□□ -1.32
TM4SF1P30408 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
TM4SF1P30408 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
TM4SF1P30408 AC026951.1-201ENST00000559530 2459 ntBASIC6.79□□□□□ -1.32
TM4SF1P30408 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.79□□□□□ -1.32
TM4SF1P30408 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
TM4SF1P30408 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
TM4SF1P30408 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
TM4SF1P30408 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.79□□□□□ -1.32
TM4SF1P30408 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
TM4SF1P30408 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
TM4SF1P30408 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
TM4SF1P30408 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
TM4SF1P30408 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms