Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
SHC1P29353 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SHC1P29353 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SHC1P29353 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SHC1P29353 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
SHC1P29353 AL034546.1-201ENST00000623740 3693 ntBASIC5.12□□□□□ -1.59
SHC1P29353 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.12□□□□□ -1.59
SHC1P29353 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SHC1P29353 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SHC1P29353 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHC1P29353 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHC1P29353 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.12□□□□□ -1.59
SHC1P29353 RN7SKP81-201ENST00000365603 331 ntBASIC5.12□□□□□ -1.59
SHC1P29353 SNORA70.6-201ENST00000383934 134 ntBASIC5.12□□□□□ -1.59
SHC1P29353 RNU1-136P-201ENST00000384181 164 ntBASIC5.12□□□□□ -1.59
SHC1P29353 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHC1P29353 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
SHC1P29353 NPM1P38-201ENST00000403835 865 ntBASIC5.12□□□□□ -1.59
SHC1P29353 RMRPP5-201ENST00000411156 267 ntBASIC5.12□□□□□ -1.59
SHC1P29353 AC079809.1-201ENST00000415468 276 ntBASIC5.12□□□□□ -1.59
SHC1P29353 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.12□□□□□ -1.59
SHC1P29353 AC104843.2-201ENST00000427666 297 ntBASIC5.12□□□□□ -1.59
SHC1P29353 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.12□□□□□ -1.59
SHC1P29353 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.12□□□□□ -1.59
SHC1P29353 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.12□□□□□ -1.59
SHC1P29353 AL136455.1-201ENST00000441083 1240 ntBASIC5.12□□□□□ -1.59
SHC1P29353 AC064862.4-201ENST00000442180 334 ntBASIC5.12□□□□□ -1.59
SHC1P29353 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.12□□□□□ -1.59
SHC1P29353 RSL24D1P2-201ENST00000445584 366 ntBASIC5.12□□□□□ -1.59
SHC1P29353 EEF1B2P6-201ENST00000445713 673 ntBASIC5.12□□□□□ -1.59
SHC1P29353 HMGN1P36-201ENST00000446623 298 ntBASIC5.12□□□□□ -1.59
SHC1P29353 AC017099.1-201ENST00000448261 1028 ntBASIC5.12□□□□□ -1.59
SHC1P29353 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.12□□□□□ -1.59
SHC1P29353 RPS23P2-201ENST00000463671 415 ntBASIC5.12□□□□□ -1.59
SHC1P29353 RPS7P6-201ENST00000485777 579 ntBASIC5.12□□□□□ -1.59
SHC1P29353 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.12□□□□□ -1.59
SHC1P29353 UGT2A3P7-201ENST00000510485 734 ntBASIC5.12□□□□□ -1.59
SHC1P29353 AC074255.1-201ENST00000511259 501 ntBASIC5.12□□□□□ -1.59
SHC1P29353 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
SHC1P29353 RNU6-615P-201ENST00000516065 106 ntBASIC5.12□□□□□ -1.59
SHC1P29353 SNORA43.3-201ENST00000517240 103 ntBASIC5.12□□□□□ -1.59
SHC1P29353 IGLV3-24-201ENST00000517477 197 ntBASIC5.12□□□□□ -1.59
SHC1P29353 CYCSP22-201ENST00000517555 339 ntBASIC5.12□□□□□ -1.59
SHC1P29353 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.12□□□□□ -1.59
SHC1P29353 OR4A43P-201ENST00000532938 908 ntBASIC5.12□□□□□ -1.59
SHC1P29353 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.12□□□□□ -1.59
SHC1P29353 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.12□□□□□ -1.59
SHC1P29353 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.12□□□□□ -1.59
SHC1P29353 AP001496.3-201ENST00000580230 913 ntBASIC5.12□□□□□ -1.59
SHC1P29353 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.12□□□□□ -1.59
SHC1P29353 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.12□□□□□ -1.59
SHC1P29353 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.12□□□□□ -1.59
SHC1P29353 AL583832.1-201ENST00000603227 784 ntBASIC5.12□□□□□ -1.59
SHC1P29353 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.12□□□□□ -1.59
SHC1P29353 LSM1P2-201ENST00000604911 322 ntBASIC5.12□□□□□ -1.59
SHC1P29353 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SHC1P29353 AC010809.3-201ENST00000621310 641 ntBASIC5.12□□□□□ -1.59
SHC1P29353 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.12□□□□□ -1.59
SHC1P29353 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SHC1P29353 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.12□□□□□ -1.59
SHC1P29353 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.12□□□□□ -1.59
SHC1P29353 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.12□□□□□ -1.59
SHC1P29353 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.12□□□□□ -1.59
SHC1P29353 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
SHC1P29353 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SHC1P29353 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHC1P29353 AC125336.1-201ENST00000508893 2827 ntBASIC5.12□□□□□ -1.59
SHC1P29353 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
SHC1P29353 AC120036.2-201ENST00000509729 1474 ntBASIC5.12□□□□□ -1.59
SHC1P29353 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHC1P29353 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHC1P29353 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SHC1P29353 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.12□□□□□ -1.59
SHC1P29353 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHC1P29353 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.12□□□□□ -1.59
SHC1P29353 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.12□□□□□ -1.59
SHC1P29353 MAPK10-328ENST00000641553 4009 ntBASIC5.12□□□□□ -1.59
SHC1P29353 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SHC1P29353 PWAR1-201ENST00000624188 2414 ntBASIC5.12□□□□□ -1.59
SHC1P29353 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHC1P29353 AC007938.2-201ENST00000604666 2634 ntBASIC5.11□□□□□ -1.59
SHC1P29353 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHC1P29353 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHC1P29353 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHC1P29353 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SHC1P29353 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHC1P29353 RNA5SP326-201ENST00000363209 110 ntBASIC5.11□□□□□ -1.59
SHC1P29353 RN7SKP69-201ENST00000365390 305 ntBASIC5.11□□□□□ -1.59
SHC1P29353 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.11□□□□□ -1.59
SHC1P29353 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.11□□□□□ -1.59
SHC1P29353 ZNF736P10Y-201ENST00000403990 1110 ntBASIC5.11□□□□□ -1.59
SHC1P29353 AC096921.1-201ENST00000411661 375 ntBASIC5.11□□□□□ -1.59
SHC1P29353 CDY17P-201ENST00000414121 1282 ntBASIC5.11□□□□□ -1.59
SHC1P29353 AP000281.1-201ENST00000444036 316 ntBASIC5.11□□□□□ -1.59
SHC1P29353 AL161636.2-201ENST00000445179 927 ntBASIC5.11□□□□□ -1.59
SHC1P29353 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC5.11□□□□□ -1.59
SHC1P29353 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SHC1P29353 RPL31P15-201ENST00000449770 338 ntBASIC5.11□□□□□ -1.59
SHC1P29353 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
SHC1P29353 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms