Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AC084824.2-201ENST00000548906 345 ntBASIC5.94□□□□□ -1.46
PDGFRAP16234 EIF1AXP2-201ENST00000555940 413 ntBASIC5.94□□□□□ -1.46
PDGFRAP16234 DPPA2P4-201ENST00000563717 878 ntBASIC5.94□□□□□ -1.46
PDGFRAP16234 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.94□□□□□ -1.46
PDGFRAP16234 AC012146.2-201ENST00000576545 416 ntBASIC5.94□□□□□ -1.46
PDGFRAP16234 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.94□□□□□ -1.46
PDGFRAP16234 AL353729.2-201ENST00000605859 1249 ntBASIC5.94□□□□□ -1.46
PDGFRAP16234 RN7SL787P-201ENST00000613000 284 ntBASIC5.94□□□□□ -1.46
PDGFRAP16234 AC126175.1-201ENST00000617041 758 ntBASIC5.94□□□□□ -1.46
PDGFRAP16234 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PDGFRAP16234 AL355480.1-201ENST00000629041 99 ntBASIC5.94□□□□□ -1.46
PDGFRAP16234 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PDGFRAP16234 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.94□□□□□ -1.46
PDGFRAP16234 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
PDGFRAP16234 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.94□□□□□ -1.46
PDGFRAP16234 Z83820.1-201ENST00000456978 1499 ntBASIC5.94□□□□□ -1.46
PDGFRAP16234 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
PDGFRAP16234 OR13C1P-202ENST00000641378 2919 ntBASIC5.94□□□□□ -1.46
PDGFRAP16234 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.94□□□□□ -1.46
PDGFRAP16234 CDC27P2-201ENST00000425026 1922 ntBASIC5.93□□□□□ -1.46
PDGFRAP16234 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.93□□□□□ -1.46
PDGFRAP16234 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PDGFRAP16234 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
PDGFRAP16234 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PDGFRAP16234 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.93□□□□□ -1.46
PDGFRAP16234 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
PDGFRAP16234 PWAR1-201ENST00000624188 2414 ntBASIC5.93□□□□□ -1.46
PDGFRAP16234 SNORA64.1-201ENST00000362600 132 ntBASIC5.93□□□□□ -1.46
PDGFRAP16234 RNA5SP326-201ENST00000363209 110 ntBASIC5.93□□□□□ -1.46
PDGFRAP16234 RNA5SP394-201ENST00000364216 119 ntBASIC5.93□□□□□ -1.46
PDGFRAP16234 RNA5SP30-201ENST00000365552 115 ntBASIC5.93□□□□□ -1.46
PDGFRAP16234 RN7SKP81-201ENST00000365603 331 ntBASIC5.93□□□□□ -1.46
PDGFRAP16234 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.93□□□□□ -1.46
PDGFRAP16234 RNA5SP178-201ENST00000410380 128 ntBASIC5.93□□□□□ -1.46
PDGFRAP16234 NENFP1-201ENST00000419476 466 ntBASIC5.93□□□□□ -1.46
PDGFRAP16234 AC093155.2-201ENST00000420734 937 ntBASIC5.93□□□□□ -1.46
PDGFRAP16234 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.93□□□□□ -1.46
PDGFRAP16234 OR10T1P-201ENST00000424327 947 ntBASIC5.93□□□□□ -1.46
PDGFRAP16234 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PDGFRAP16234 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PDGFRAP16234 MTND6P5-201ENST00000448266 512 ntBASIC5.93□□□□□ -1.46
PDGFRAP16234 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.93□□□□□ -1.46
PDGFRAP16234 SEPT7P6-201ENST00000469999 1143 ntBASIC5.93□□□□□ -1.46
PDGFRAP16234 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.93□□□□□ -1.46
PDGFRAP16234 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.93□□□□□ -1.46
PDGFRAP16234 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.93□□□□□ -1.46
PDGFRAP16234 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.93□□□□□ -1.46
PDGFRAP16234 HSPE1P2-201ENST00000554777 306 ntBASIC5.93□□□□□ -1.46
PDGFRAP16234 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
PDGFRAP16234 AC079776.5-201ENST00000641920 211 ntBASIC5.93□□□□□ -1.46
PDGFRAP16234 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
PDGFRAP16234 MRE11P1-201ENST00000464884 2127 ntBASIC5.93□□□□□ -1.46
PDGFRAP16234 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
PDGFRAP16234 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.93□□□□□ -1.46
PDGFRAP16234 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.93□□□□□ -1.46
PDGFRAP16234 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDGFRAP16234 AC104964.3-201ENST00000606115 2860 ntBASIC5.92□□□□□ -1.46
PDGFRAP16234 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.92□□□□□ -1.46
PDGFRAP16234 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
PDGFRAP16234 AC092070.2-203ENST00000598377 3644 ntBASIC5.92□□□□□ -1.46
PDGFRAP16234 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDGFRAP16234 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDGFRAP16234 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDGFRAP16234 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
PDGFRAP16234 AC092642.1-201ENST00000392417 425 ntBASIC5.92□□□□□ -1.46
PDGFRAP16234 AC005042.1-201ENST00000393397 800 ntBASIC5.92□□□□□ -1.46
PDGFRAP16234 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
PDGFRAP16234 ZNF736P10Y-201ENST00000403990 1110 ntBASIC5.92□□□□□ -1.46
PDGFRAP16234 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.92□□□□□ -1.46
PDGFRAP16234 RNF10P1-201ENST00000418589 369 ntBASIC5.92□□□□□ -1.46
PDGFRAP16234 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.92□□□□□ -1.46
PDGFRAP16234 TMEM183AP1-205ENST00000432739 290 ntBASIC5.92□□□□□ -1.46
PDGFRAP16234 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.92□□□□□ -1.46
PDGFRAP16234 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.92□□□□□ -1.46
PDGFRAP16234 PPIAP20-201ENST00000449839 135 ntBASIC5.92□□□□□ -1.46
PDGFRAP16234 YWHAEP1-201ENST00000453697 763 ntBASIC5.92□□□□□ -1.46
PDGFRAP16234 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
PDGFRAP16234 RN7SL273P-201ENST00000481561 299 ntBASIC5.92□□□□□ -1.46
PDGFRAP16234 RPS3AP15-201ENST00000483874 781 ntBASIC5.92□□□□□ -1.46
PDGFRAP16234 HMGB3P14-201ENST00000494195 599 ntBASIC5.92□□□□□ -1.46
PDGFRAP16234 DUTP7-201ENST00000507982 486 ntBASIC5.92□□□□□ -1.46
PDGFRAP16234 AC109481.1-201ENST00000509173 282 ntBASIC5.92□□□□□ -1.46
PDGFRAP16234 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.92□□□□□ -1.46
PDGFRAP16234 IGLV3-24-201ENST00000517477 197 ntBASIC5.92□□□□□ -1.46
PDGFRAP16234 AC136777.2-201ENST00000522979 358 ntBASIC5.92□□□□□ -1.46
PDGFRAP16234 MRPS16P1-201ENST00000523462 412 ntBASIC5.92□□□□□ -1.46
PDGFRAP16234 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.92□□□□□ -1.46
PDGFRAP16234 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.92□□□□□ -1.46
PDGFRAP16234 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.92□□□□□ -1.46
PDGFRAP16234 MTATP6P25-201ENST00000574491 261 ntBASIC5.92□□□□□ -1.46
PDGFRAP16234 AC025857.2-201ENST00000602711 238 ntBASIC5.92□□□□□ -1.46
PDGFRAP16234 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.92□□□□□ -1.46
PDGFRAP16234 MIR6862-1-201ENST00000613016 70 ntBASIC5.92□□□□□ -1.46
PDGFRAP16234 MIR6862-2-201ENST00000614755 70 ntBASIC5.92□□□□□ -1.46
PDGFRAP16234 MIR6729-201ENST00000618194 65 ntBASIC5.92□□□□□ -1.46
PDGFRAP16234 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.92□□□□□ -1.46
PDGFRAP16234 AL390318.1-201ENST00000624564 687 ntBASIC5.92□□□□□ -1.46
PDGFRAP16234 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.92□□□□□ -1.46
PDGFRAP16234 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
PDGFRAP16234 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms