Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC6.44□□□□□ -1.38
COL6A2P12110 HMGN2P47-201ENST00000559378 272 ntBASIC6.44□□□□□ -1.38
COL6A2P12110 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC6.44□□□□□ -1.38
COL6A2P12110 AC007599.1-201ENST00000568688 1174 ntBASIC6.44□□□□□ -1.38
COL6A2P12110 RN7SL208P-201ENST00000577964 296 ntBASIC6.44□□□□□ -1.38
COL6A2P12110 AC245052.7-201ENST00000601161 359 ntBASIC6.44□□□□□ -1.38
COL6A2P12110 AC105129.3-201ENST00000605455 485 ntBASIC6.44□□□□□ -1.38
COL6A2P12110 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.44□□□□□ -1.38
COL6A2P12110 OR2BH1P-201ENST00000608850 864 ntBASIC6.44□□□□□ -1.38
COL6A2P12110 AC009237.15-201ENST00000610252 501 ntBASIC6.44□□□□□ -1.38
COL6A2P12110 AP000255.1-201ENST00000610276 676 ntBASIC6.44□□□□□ -1.38
COL6A2P12110 AC024257.5-201ENST00000612739 531 ntBASIC6.44□□□□□ -1.38
COL6A2P12110 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC6.44□□□□□ -1.38
COL6A2P12110 AC103564.3-201ENST00000621194 220 ntBASIC6.44□□□□□ -1.38
COL6A2P12110 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL6A2P12110 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL6A2P12110 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.44□□□□□ -1.38
COL6A2P12110 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL6A2P12110 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL6A2P12110 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
COL6A2P12110 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL6A2P12110 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.44□□□□□ -1.38
COL6A2P12110 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL6A2P12110 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
COL6A2P12110 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL6A2P12110 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
COL6A2P12110 MTND4P10-201ENST00000446199 1363 ntBASIC6.44□□□□□ -1.38
COL6A2P12110 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.44□□□□□ -1.38
COL6A2P12110 AC093844.1-201ENST00000514910 1361 ntBASIC6.44□□□□□ -1.38
COL6A2P12110 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.43□□□□□ -1.38
COL6A2P12110 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COL6A2P12110 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COL6A2P12110 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COL6A2P12110 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL6A2P12110 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
COL6A2P12110 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL6A2P12110 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL6A2P12110 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.43□□□□□ -1.38
COL6A2P12110 AL451046.1-201ENST00000406097 534 ntBASIC6.43□□□□□ -1.38
COL6A2P12110 RN7SKP117-201ENST00000410175 264 ntBASIC6.43□□□□□ -1.38
COL6A2P12110 RN7SKP91-201ENST00000410852 288 ntBASIC6.43□□□□□ -1.38
COL6A2P12110 AL356968.2-201ENST00000412769 1257 ntBASIC6.43□□□□□ -1.38
COL6A2P12110 MTND4P22-201ENST00000413116 1169 ntBASIC6.43□□□□□ -1.38
COL6A2P12110 BTF3L4P1-201ENST00000413813 468 ntBASIC6.43□□□□□ -1.38
COL6A2P12110 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.43□□□□□ -1.38
COL6A2P12110 CDY17P-201ENST00000414121 1282 ntBASIC6.43□□□□□ -1.38
COL6A2P12110 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC6.43□□□□□ -1.38
COL6A2P12110 RPS17P17-201ENST00000419392 409 ntBASIC6.43□□□□□ -1.38
COL6A2P12110 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.43□□□□□ -1.38
COL6A2P12110 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC6.43□□□□□ -1.38
COL6A2P12110 AC009303.1-201ENST00000426307 352 ntBASIC6.43□□□□□ -1.38
COL6A2P12110 AL138479.1-201ENST00000426913 484 ntBASIC6.43□□□□□ -1.38
COL6A2P12110 CDY8P-201ENST00000428380 1279 ntBASIC6.43□□□□□ -1.38
COL6A2P12110 MTND1P34-201ENST00000438556 671 ntBASIC6.43□□□□□ -1.38
COL6A2P12110 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC6.43□□□□□ -1.38
COL6A2P12110 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC6.43□□□□□ -1.38
COL6A2P12110 UBBP5-201ENST00000446970 266 ntBASIC6.43□□□□□ -1.38
COL6A2P12110 CDY20P-201ENST00000447528 1279 ntBASIC6.43□□□□□ -1.38
COL6A2P12110 CCNJP1-201ENST00000450600 1149 ntBASIC6.43□□□□□ -1.38
COL6A2P12110 AL133477.1-201ENST00000457472 514 ntBASIC6.43□□□□□ -1.38
COL6A2P12110 RPS20P4-201ENST00000461659 355 ntBASIC6.43□□□□□ -1.38
COL6A2P12110 AC099340.1-201ENST00000475247 599 ntBASIC6.43□□□□□ -1.38
COL6A2P12110 RN7SL37P-201ENST00000490461 307 ntBASIC6.43□□□□□ -1.38
COL6A2P12110 AC008565.1-201ENST00000509046 885 ntBASIC6.43□□□□□ -1.38
COL6A2P12110 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.43□□□□□ -1.38
COL6A2P12110 XKRY-201ENST00000510392 1100 ntBASIC6.43□□□□□ -1.38
COL6A2P12110 AC108120.2-201ENST00000512973 294 ntBASIC6.43□□□□□ -1.38
COL6A2P12110 NPM1P21-201ENST00000513394 762 ntBASIC6.43□□□□□ -1.38
COL6A2P12110 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.43□□□□□ -1.38
COL6A2P12110 IGKV2D-38-201ENST00000518423 240 ntBASIC6.43□□□□□ -1.38
COL6A2P12110 IGHVII-51-2-201ENST00000519778 259 ntBASIC6.43□□□□□ -1.38
COL6A2P12110 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.43□□□□□ -1.38
COL6A2P12110 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC6.43□□□□□ -1.38
COL6A2P12110 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC6.43□□□□□ -1.38
COL6A2P12110 ERP27-202ENST00000540097 993 ntTSL 2 BASIC6.43□□□□□ -1.38
COL6A2P12110 AL121579.2-201ENST00000555466 590 ntBASIC6.43□□□□□ -1.38
COL6A2P12110 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.43□□□□□ -1.38
COL6A2P12110 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC6.43□□□□□ -1.38
COL6A2P12110 AC135628.1-201ENST00000568867 534 ntBASIC6.43□□□□□ -1.38
COL6A2P12110 AC022662.1-201ENST00000580252 331 ntBASIC6.43□□□□□ -1.38
COL6A2P12110 MIR4433B-201ENST00000581329 102 ntBASIC6.43□□□□□ -1.38
COL6A2P12110 AC103987.3-201ENST00000582071 292 ntBASIC6.43□□□□□ -1.38
COL6A2P12110 AC090241.1-201ENST00000587732 621 ntBASIC6.43□□□□□ -1.38
COL6A2P12110 AC068020.1-201ENST00000594215 661 ntBASIC6.43□□□□□ -1.38
COL6A2P12110 AC130352.1-201ENST00000602979 661 ntBASIC6.43□□□□□ -1.38
COL6A2P12110 AC007490.1-201ENST00000624321 703 ntBASIC6.43□□□□□ -1.38
COL6A2P12110 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC6.43□□□□□ -1.38
COL6A2P12110 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC6.43□□□□□ -1.38
COL6A2P12110 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL6A2P12110 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL6A2P12110 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.43□□□□□ -1.38
COL6A2P12110 AC112255.1-201ENST00000624070 2493 ntBASIC6.43□□□□□ -1.38
COL6A2P12110 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.43□□□□□ -1.38
COL6A2P12110 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.43□□□□□ -1.38
COL6A2P12110 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
COL6A2P12110 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.43□□□□□ -1.38
COL6A2P12110 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.43□□□□□ -1.38
COL6A2P12110 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC6.43□□□□□ -1.38
COL6A2P12110 AL033543.1-201ENST00000623440 13454 ntBASIC6.43□□□□□ -1.38
COL6A2P12110 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms