Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.86□□□□□ -1.47
KRT3P12035 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
KRT3P12035 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
KRT3P12035 AL158827.1-201ENST00000416300 391 ntBASIC5.86□□□□□ -1.47
KRT3P12035 VN1R3-201ENST00000418822 919 ntBASIC5.86□□□□□ -1.47
KRT3P12035 AC093155.2-201ENST00000420734 937 ntBASIC5.86□□□□□ -1.47
KRT3P12035 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.86□□□□□ -1.47
KRT3P12035 BX119321.1-201ENST00000428912 797 ntBASIC5.86□□□□□ -1.47
KRT3P12035 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.86□□□□□ -1.47
KRT3P12035 BX276092.6-201ENST00000430476 250 ntBASIC5.86□□□□□ -1.47
KRT3P12035 OR52E7P-201ENST00000452394 933 ntBASIC5.86□□□□□ -1.47
KRT3P12035 AP000547.1-201ENST00000454360 617 ntBASIC5.86□□□□□ -1.47
KRT3P12035 BX276092.8-201ENST00000455722 250 ntBASIC5.86□□□□□ -1.47
KRT3P12035 RNU7-157P-201ENST00000459600 66 ntBASIC5.86□□□□□ -1.47
KRT3P12035 AC084754.1-201ENST00000463466 464 ntBASIC5.86□□□□□ -1.47
KRT3P12035 PSAT1P4-201ENST00000466500 526 ntBASIC5.86□□□□□ -1.47
KRT3P12035 RN7SL188P-201ENST00000469842 285 ntBASIC5.86□□□□□ -1.47
KRT3P12035 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.86□□□□□ -1.47
KRT3P12035 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.86□□□□□ -1.47
KRT3P12035 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.86□□□□□ -1.47
KRT3P12035 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.86□□□□□ -1.47
KRT3P12035 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.86□□□□□ -1.47
KRT3P12035 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.86□□□□□ -1.47
KRT3P12035 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.86□□□□□ -1.47
KRT3P12035 NDUFA5P11-201ENST00000567995 343 ntBASIC5.86□□□□□ -1.47
KRT3P12035 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.86□□□□□ -1.47
KRT3P12035 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.86□□□□□ -1.47
KRT3P12035 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.86□□□□□ -1.47
KRT3P12035 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.86□□□□□ -1.47
KRT3P12035 AC025574.2-201ENST00000615621 514 ntBASIC5.86□□□□□ -1.47
KRT3P12035 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.86□□□□□ -1.47
KRT3P12035 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.86□□□□□ -1.47
KRT3P12035 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
KRT3P12035 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
KRT3P12035 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.86□□□□□ -1.47
KRT3P12035 AC007938.2-201ENST00000604666 2634 ntBASIC5.86□□□□□ -1.47
KRT3P12035 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
KRT3P12035 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.86□□□□□ -1.47
KRT3P12035 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.85□□□□□ -1.47
KRT3P12035 AC114786.1-201ENST00000512892 1415 ntBASIC5.85□□□□□ -1.47
KRT3P12035 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
KRT3P12035 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
KRT3P12035 AP005435.3-201ENST00000531260 3198 ntBASIC5.85□□□□□ -1.47
KRT3P12035 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
KRT3P12035 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
KRT3P12035 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
KRT3P12035 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.85□□□□□ -1.47
KRT3P12035 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
KRT3P12035 PEX12P1-201ENST00000400284 1048 ntBASIC5.85□□□□□ -1.47
KRT3P12035 RPL34P3-201ENST00000421454 338 ntBASIC5.85□□□□□ -1.47
KRT3P12035 IPPKP1-201ENST00000422501 768 ntBASIC5.85□□□□□ -1.47
KRT3P12035 AC007161.1-204ENST00000423039 460 ntBASIC5.85□□□□□ -1.47
KRT3P12035 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
KRT3P12035 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
KRT3P12035 RPL7P56-201ENST00000429441 717 ntBASIC5.85□□□□□ -1.47
KRT3P12035 NFYAP1-201ENST00000431953 972 ntBASIC5.85□□□□□ -1.47
KRT3P12035 AL138899.2-201ENST00000439139 499 ntBASIC5.85□□□□□ -1.47
KRT3P12035 AL450996.1-201ENST00000445574 1202 ntBASIC5.85□□□□□ -1.47
KRT3P12035 IGBP1P3-201ENST00000447449 1000 ntBASIC5.85□□□□□ -1.47
KRT3P12035 AZGP1P2-201ENST00000454506 345 ntBASIC5.85□□□□□ -1.47
KRT3P12035 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
KRT3P12035 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
KRT3P12035 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.85□□□□□ -1.47
KRT3P12035 PSMA2P2-201ENST00000504319 686 ntBASIC5.85□□□□□ -1.47
KRT3P12035 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.85□□□□□ -1.47
KRT3P12035 AC109481.1-201ENST00000509173 282 ntBASIC5.85□□□□□ -1.47
KRT3P12035 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.85□□□□□ -1.47
KRT3P12035 SNORD46.2-201ENST00000516021 102 ntBASIC5.85□□□□□ -1.47
KRT3P12035 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.85□□□□□ -1.47
KRT3P12035 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.85□□□□□ -1.47
KRT3P12035 OR4A17P-201ENST00000526032 904 ntBASIC5.85□□□□□ -1.47
KRT3P12035 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
KRT3P12035 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.85□□□□□ -1.47
KRT3P12035 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.85□□□□□ -1.47
KRT3P12035 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.85□□□□□ -1.47
KRT3P12035 AL139124.1-201ENST00000609123 421 ntBASIC5.85□□□□□ -1.47
KRT3P12035 MIR6778-201ENST00000617912 73 ntBASIC5.85□□□□□ -1.47
KRT3P12035 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.85□□□□□ -1.47
KRT3P12035 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
KRT3P12035 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
KRT3P12035 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.85□□□□□ -1.47
KRT3P12035 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.85□□□□□ -1.47
KRT3P12035 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.85□□□□□ -1.47
KRT3P12035 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
KRT3P12035 YES1P1-201ENST00000418510 1628 ntBASIC5.85□□□□□ -1.47
KRT3P12035 OR13C1P-202ENST00000641378 2919 ntBASIC5.85□□□□□ -1.47
KRT3P12035 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.84□□□□□ -1.47
KRT3P12035 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
KRT3P12035 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
KRT3P12035 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.84□□□□□ -1.47
KRT3P12035 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
KRT3P12035 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
KRT3P12035 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
KRT3P12035 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
KRT3P12035 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
KRT3P12035 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
KRT3P12035 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.84□□□□□ -1.47
KRT3P12035 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.84□□□□□ -1.47
KRT3P12035 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
KRT3P12035 U3.28-201ENST00000391249 210 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms