Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.4□□□□□ -1.71
CD28P10747 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC4.4□□□□□ -1.71
CD28P10747 AL049779.3-201ENST00000557141 606 ntBASIC4.4□□□□□ -1.71
CD28P10747 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC4.4□□□□□ -1.71
CD28P10747 AC044860.2-201ENST00000561005 179 ntBASIC4.4□□□□□ -1.71
CD28P10747 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CD28P10747 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.4□□□□□ -1.71
CD28P10747 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CD28P10747 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.4□□□□□ -1.71
CD28P10747 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC4.4□□□□□ -1.71
CD28P10747 AL360012.1-201ENST00000602813 131 ntBASIC4.4□□□□□ -1.71
CD28P10747 PPATP2-201ENST00000605635 508 ntBASIC4.4□□□□□ -1.71
CD28P10747 AL355974.3-201ENST00000617383 467 ntBASIC4.4□□□□□ -1.71
CD28P10747 AC008115.4-201ENST00000619780 775 ntBASIC4.4□□□□□ -1.71
CD28P10747 MIR6837-201ENST00000620884 64 ntBASIC4.4□□□□□ -1.71
CD28P10747 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.4□□□□□ -1.71
CD28P10747 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CD28P10747 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
CD28P10747 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.4□□□□□ -1.71
CD28P10747 AL590763.1-201ENST00000398297 1545 ntBASIC4.4□□□□□ -1.71
CD28P10747 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CD28P10747 AC109780.1-201ENST00000451768 1344 ntBASIC4.4□□□□□ -1.71
CD28P10747 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
CD28P10747 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
CD28P10747 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC4.4□□□□□ -1.71
CD28P10747 AC114876.1-201ENST00000490962 1366 ntBASIC4.4□□□□□ -1.71
CD28P10747 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
CD28P10747 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CD28P10747 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.39□□□□□ -1.71
CD28P10747 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CD28P10747 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CD28P10747 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CD28P10747 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CD28P10747 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CD28P10747 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.39□□□□□ -1.71
CD28P10747 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CD28P10747 AC140479.2-201ENST00000421567 3130 ntBASIC4.39□□□□□ -1.71
CD28P10747 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.39□□□□□ -1.71
CD28P10747 SNORD1C-201ENST00000363315 78 ntBASIC4.39□□□□□ -1.71
CD28P10747 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
CD28P10747 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC4.39□□□□□ -1.71
CD28P10747 MIR130A-201ENST00000385274 89 ntBASIC4.39□□□□□ -1.71
CD28P10747 RNU1-77P-201ENST00000390868 162 ntBASIC4.39□□□□□ -1.71
CD28P10747 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC4.39□□□□□ -1.71
CD28P10747 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.39□□□□□ -1.71
CD28P10747 GABARAPL3-201ENST00000412799 354 ntBASIC4.39□□□□□ -1.71
CD28P10747 AC092651.1-201ENST00000426110 312 ntBASIC4.39□□□□□ -1.71
CD28P10747 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.39□□□□□ -1.71
CD28P10747 RPL7L1P9-201ENST00000431298 745 ntBASIC4.39□□□□□ -1.71
CD28P10747 CYCSP6-201ENST00000434498 302 ntBASIC4.39□□□□□ -1.71
CD28P10747 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.39□□□□□ -1.71
CD28P10747 VDAC2P4-201ENST00000452925 711 ntBASIC4.39□□□□□ -1.71
CD28P10747 AC079080.1-201ENST00000479841 822 ntBASIC4.39□□□□□ -1.71
CD28P10747 RPL7P39-201ENST00000481157 744 ntBASIC4.39□□□□□ -1.71
CD28P10747 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC4.39□□□□□ -1.71
CD28P10747 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC4.39□□□□□ -1.71
CD28P10747 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.39□□□□□ -1.71
CD28P10747 OR10G5P-201ENST00000532733 358 ntBASIC4.39□□□□□ -1.71
CD28P10747 AC244502.2-201ENST00000543361 851 ntBASIC4.39□□□□□ -1.71
CD28P10747 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.39□□□□□ -1.71
CD28P10747 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC4.39□□□□□ -1.71
CD28P10747 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC4.39□□□□□ -1.71
CD28P10747 OOSP1P2-201ENST00000579644 351 ntBASIC4.39□□□□□ -1.71
CD28P10747 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC4.39□□□□□ -1.71
CD28P10747 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CD28P10747 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.39□□□□□ -1.71
CD28P10747 AC018445.2-201ENST00000622987 260 ntBASIC4.39□□□□□ -1.71
CD28P10747 UBA3-213ENST00000631029 123 ntTSL 5 BASIC4.39□□□□□ -1.71
CD28P10747 AC136428.4-201ENST00000634254 1155 ntBASIC4.39□□□□□ -1.71
CD28P10747 MAPK10-350ENST00000641777 965 ntBASIC4.39□□□□□ -1.71
CD28P10747 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC4.39□□□□□ -1.71
CD28P10747 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CD28P10747 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CD28P10747 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CD28P10747 CR383656.5-201ENST00000547616 1340 ntBASIC4.39□□□□□ -1.71
CD28P10747 PABPC1P6-201ENST00000445594 1829 ntBASIC4.39□□□□□ -1.71
CD28P10747 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.39□□□□□ -1.71
CD28P10747 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CD28P10747 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CD28P10747 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CD28P10747 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.39□□□□□ -1.71
CD28P10747 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
CD28P10747 AL161912.4-201ENST00000623889 2468 ntBASIC4.38□□□□□ -1.71
CD28P10747 MFSD8-239ENST00000641590 2479 ntBASIC4.38□□□□□ -1.71
CD28P10747 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CD28P10747 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CD28P10747 AL592429.1-201ENST00000403909 1473 ntBASIC4.38□□□□□ -1.71
CD28P10747 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CD28P10747 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CD28P10747 AL161756.3-201ENST00000641216 2071 ntBASIC4.38□□□□□ -1.71
CD28P10747 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CD28P10747 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CD28P10747 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CD28P10747 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CD28P10747 SNORA70-201ENST00000384436 135 ntBASIC4.38□□□□□ -1.71
CD28P10747 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.38□□□□□ -1.71
CD28P10747 RNU6-233P-201ENST00000410845 141 ntBASIC4.38□□□□□ -1.71
CD28P10747 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.38□□□□□ -1.71
CD28P10747 AL590399.2-201ENST00000427536 309 ntBASIC4.38□□□□□ -1.71
CD28P10747 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms