Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL4A1P02462 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC6.44□□□□□ -1.38
COL4A1P02462 AP003400.3-201ENST00000624904 346 ntBASIC6.44□□□□□ -1.38
COL4A1P02462 AL353662.3-201ENST00000625131 237 ntBASIC6.44□□□□□ -1.38
COL4A1P02462 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL4A1P02462 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
COL4A1P02462 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
COL4A1P02462 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL4A1P02462 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
COL4A1P02462 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL4A1P02462 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL4A1P02462 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.44□□□□□ -1.38
COL4A1P02462 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL4A1P02462 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.44□□□□□ -1.38
COL4A1P02462 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL4A1P02462 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL4A1P02462 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL4A1P02462 AC015799.1-201ENST00000622996 3122 ntBASIC6.43□□□□□ -1.38
COL4A1P02462 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC6.43□□□□□ -1.38
COL4A1P02462 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.43□□□□□ -1.38
COL4A1P02462 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COL4A1P02462 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL4A1P02462 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL4A1P02462 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC6.43□□□□□ -1.38
COL4A1P02462 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL4A1P02462 AL449283.1-201ENST00000602631 3403 ntBASIC6.43□□□□□ -1.38
COL4A1P02462 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.43□□□□□ -1.38
COL4A1P02462 RN7SKP103-201ENST00000363848 320 ntBASIC6.43□□□□□ -1.38
COL4A1P02462 MIR141-201ENST00000384975 95 ntBASIC6.43□□□□□ -1.38
COL4A1P02462 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL4A1P02462 RPL12P17-201ENST00000432393 498 ntBASIC6.43□□□□□ -1.38
COL4A1P02462 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC6.43□□□□□ -1.38
COL4A1P02462 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.43□□□□□ -1.38
COL4A1P02462 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.43□□□□□ -1.38
COL4A1P02462 TAAR4P-201ENST00000454843 1039 ntBASIC6.43□□□□□ -1.38
COL4A1P02462 AC002075.1-201ENST00000457396 676 ntBASIC6.43□□□□□ -1.38
COL4A1P02462 RPL7P16-201ENST00000479738 738 ntBASIC6.43□□□□□ -1.38
COL4A1P02462 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.43□□□□□ -1.38
COL4A1P02462 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC6.43□□□□□ -1.38
COL4A1P02462 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC6.43□□□□□ -1.38
COL4A1P02462 AL022394.1-201ENST00000606979 292 ntBASIC6.43□□□□□ -1.38
COL4A1P02462 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.43□□□□□ -1.38
COL4A1P02462 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
COL4A1P02462 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.43□□□□□ -1.38
COL4A1P02462 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL4A1P02462 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.43□□□□□ -1.38
COL4A1P02462 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL4A1P02462 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL4A1P02462 DPY19L2P2-203ENST00000435536 1858 ntBASIC6.43□□□□□ -1.38
COL4A1P02462 AC007996.1-201ENST00000620414 2821 ntBASIC6.43□□□□□ -1.38
COL4A1P02462 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL4A1P02462 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
COL4A1P02462 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC6.43□□□□□ -1.38
COL4A1P02462 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.43□□□□□ -1.38
COL4A1P02462 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC6.43□□□□□ -1.38
COL4A1P02462 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC6.42□□□□□ -1.38
COL4A1P02462 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
COL4A1P02462 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
COL4A1P02462 GJA6P-201ENST00000415117 1042 ntBASIC6.42□□□□□ -1.38
COL4A1P02462 AC019050.1-201ENST00000418508 492 ntBASIC6.42□□□□□ -1.38
COL4A1P02462 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.42□□□□□ -1.38
COL4A1P02462 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.42□□□□□ -1.38
COL4A1P02462 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.42□□□□□ -1.38
COL4A1P02462 RPL7P11-201ENST00000437586 658 ntBASIC6.42□□□□□ -1.38
COL4A1P02462 AC073465.2-201ENST00000440938 498 ntBASIC6.42□□□□□ -1.38
COL4A1P02462 RPL31P44-201ENST00000447680 377 ntBASIC6.42□□□□□ -1.38
COL4A1P02462 AC096741.1-201ENST00000472250 846 ntBASIC6.42□□□□□ -1.38
COL4A1P02462 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC6.42□□□□□ -1.38
COL4A1P02462 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.42□□□□□ -1.38
COL4A1P02462 RNA5SP392-201ENST00000516905 112 ntBASIC6.42□□□□□ -1.38
COL4A1P02462 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC6.42□□□□□ -1.38
COL4A1P02462 AC005000.1-201ENST00000536192 288 ntBASIC6.42□□□□□ -1.38
COL4A1P02462 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.42□□□□□ -1.38
COL4A1P02462 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.42□□□□□ -1.38
COL4A1P02462 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.42□□□□□ -1.38
COL4A1P02462 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.42□□□□□ -1.38
COL4A1P02462 AC009597.2-201ENST00000604659 592 ntBASIC6.42□□□□□ -1.38
COL4A1P02462 AC074101.1-201ENST00000637861 241 ntBASIC6.42□□□□□ -1.38
COL4A1P02462 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
COL4A1P02462 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL4A1P02462 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL4A1P02462 AL158152.1-201ENST00000602652 1435 ntBASIC6.42□□□□□ -1.38
COL4A1P02462 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.42□□□□□ -1.38
COL4A1P02462 THAP12P4-201ENST00000528321 2266 ntBASIC6.42□□□□□ -1.38
COL4A1P02462 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.42□□□□□ -1.38
COL4A1P02462 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL4A1P02462 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL4A1P02462 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6.42□□□□□ -1.38
COL4A1P02462 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL4A1P02462 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL4A1P02462 FAR2P2-201ENST00000413041 594 ntBASIC6.42□□□□□ -1.38
COL4A1P02462 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.42□□□□□ -1.38
COL4A1P02462 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.42□□□□□ -1.38
COL4A1P02462 FAR2P4-202ENST00000425399 584 ntBASIC6.42□□□□□ -1.38
COL4A1P02462 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC6.42□□□□□ -1.38
COL4A1P02462 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.42□□□□□ -1.38
COL4A1P02462 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC6.42□□□□□ -1.38
COL4A1P02462 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC6.42□□□□□ -1.38
COL4A1P02462 AC073072.2-201ENST00000447425 348 ntBASIC6.42□□□□□ -1.38
COL4A1P02462 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms