Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
MBD4O95243 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.74□□□□□ -1.33
MBD4O95243 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
MBD4O95243 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.74□□□□□ -1.33
MBD4O95243 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.74□□□□□ -1.33
MBD4O95243 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
MBD4O95243 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
MBD4O95243 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
MBD4O95243 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
MBD4O95243 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
MBD4O95243 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
MBD4O95243 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.74□□□□□ -1.33
MBD4O95243 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
MBD4O95243 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
MBD4O95243 AL137141.1-201ENST00000624622 4836 ntBASIC6.73□□□□□ -1.33
MBD4O95243 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
MBD4O95243 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
MBD4O95243 AL034546.1-201ENST00000623740 3693 ntBASIC6.73□□□□□ -1.33
MBD4O95243 RNA5SP132-201ENST00000364725 118 ntBASIC6.73□□□□□ -1.33
MBD4O95243 SNORA70.9-201ENST00000384370 135 ntBASIC6.73□□□□□ -1.33
MBD4O95243 GAPDHP42-201ENST00000406848 981 ntBASIC6.73□□□□□ -1.33
MBD4O95243 RN7SKP229-201ENST00000410465 302 ntBASIC6.73□□□□□ -1.33
MBD4O95243 RN7SKP279-201ENST00000411383 298 ntBASIC6.73□□□□□ -1.33
MBD4O95243 RPL23AP18-201ENST00000416139 468 ntBASIC6.73□□□□□ -1.33
MBD4O95243 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.73□□□□□ -1.33
MBD4O95243 AL034379.1-201ENST00000423216 253 ntBASIC6.73□□□□□ -1.33
MBD4O95243 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.73□□□□□ -1.33
MBD4O95243 AC019185.1-201ENST00000442718 389 ntBASIC6.73□□□□□ -1.33
MBD4O95243 RSL24D1P2-201ENST00000445584 366 ntBASIC6.73□□□□□ -1.33
MBD4O95243 C1DP3-201ENST00000455013 423 ntBASIC6.73□□□□□ -1.33
MBD4O95243 RANP1-206ENST00000455094 651 ntBASIC6.73□□□□□ -1.33
MBD4O95243 RPL35AP19-201ENST00000469425 329 ntBASIC6.73□□□□□ -1.33
MBD4O95243 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.73□□□□□ -1.33
MBD4O95243 RPL7L1P4-201ENST00000513004 707 ntBASIC6.73□□□□□ -1.33
MBD4O95243 SNORA48.9-201ENST00000516419 162 ntBASIC6.73□□□□□ -1.33
MBD4O95243 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.73□□□□□ -1.33
MBD4O95243 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
MBD4O95243 AC078878.1-201ENST00000539832 958 ntBASIC6.73□□□□□ -1.33
MBD4O95243 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.73□□□□□ -1.33
MBD4O95243 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.73□□□□□ -1.33
MBD4O95243 NPM1P45-201ENST00000583151 559 ntBASIC6.73□□□□□ -1.33
MBD4O95243 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.73□□□□□ -1.33
MBD4O95243 FAM60CP-201ENST00000591086 664 ntBASIC6.73□□□□□ -1.33
MBD4O95243 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.73□□□□□ -1.33
MBD4O95243 AC025574.2-201ENST00000615621 514 ntBASIC6.73□□□□□ -1.33
MBD4O95243 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.73□□□□□ -1.33
MBD4O95243 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
MBD4O95243 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
MBD4O95243 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
MBD4O95243 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
MBD4O95243 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.73□□□□□ -1.33
MBD4O95243 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
MBD4O95243 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
MBD4O95243 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.72□□□□□ -1.33
MBD4O95243 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
MBD4O95243 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
MBD4O95243 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.72□□□□□ -1.33
MBD4O95243 AC011503.2-201ENST00000594230 1500 ntBASIC6.72□□□□□ -1.33
MBD4O95243 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
MBD4O95243 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.72□□□□□ -1.33
MBD4O95243 RNA5SP234-201ENST00000363916 119 ntBASIC6.72□□□□□ -1.33
MBD4O95243 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
MBD4O95243 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
MBD4O95243 RPL11P3-201ENST00000395256 523 ntBASIC6.72□□□□□ -1.33
MBD4O95243 GLS-203ENST00000409215 632 ntTSL 4 BASIC6.72□□□□□ -1.33
MBD4O95243 KRT8P51-201ENST00000438938 274 ntBASIC6.72□□□□□ -1.33
MBD4O95243 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.72□□□□□ -1.33
MBD4O95243 RN7SL184P-201ENST00000488308 297 ntBASIC6.72□□□□□ -1.33
MBD4O95243 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.72□□□□□ -1.33
MBD4O95243 SUMO2P4-201ENST00000504193 276 ntBASIC6.72□□□□□ -1.33
MBD4O95243 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
MBD4O95243 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.72□□□□□ -1.33
MBD4O95243 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.72□□□□□ -1.33
MBD4O95243 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.72□□□□□ -1.33
MBD4O95243 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.72□□□□□ -1.33
MBD4O95243 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.72□□□□□ -1.33
MBD4O95243 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC6.72□□□□□ -1.33
MBD4O95243 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.72□□□□□ -1.33
MBD4O95243 AC109309.2-201ENST00000612597 332 ntBASIC6.72□□□□□ -1.33
MBD4O95243 AL031658.2-201ENST00000616850 651 ntBASIC6.72□□□□□ -1.33
MBD4O95243 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
MBD4O95243 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.72□□□□□ -1.33
MBD4O95243 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
MBD4O95243 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
MBD4O95243 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
MBD4O95243 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
MBD4O95243 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.72□□□□□ -1.33
MBD4O95243 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
MBD4O95243 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
MBD4O95243 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
MBD4O95243 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.33
MBD4O95243 AC068870.1-201ENST00000563737 2455 ntBASIC6.71□□□□□ -1.33
MBD4O95243 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.33
MBD4O95243 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
MBD4O95243 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
MBD4O95243 RNU6-386P-201ENST00000362650 107 ntBASIC6.71□□□□□ -1.34
MBD4O95243 RNU6-819P-201ENST00000364116 107 ntBASIC6.71□□□□□ -1.34
MBD4O95243 RN7SKP28-201ENST00000364770 305 ntBASIC6.71□□□□□ -1.34
MBD4O95243 RNU1-136P-201ENST00000384181 164 ntBASIC6.71□□□□□ -1.34
MBD4O95243 MIR143-201ENST00000385300 106 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 148.5 ms