Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 AL136038.1-201ENST00000497246 351 ntBASIC5.12□□□□□ -1.59
LMX1BO60663 RN7SL284P-201ENST00000498823 275 ntBASIC5.12□□□□□ -1.59
LMX1BO60663 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.12□□□□□ -1.59
LMX1BO60663 SNORA70.17-201ENST00000516449 133 ntBASIC5.12□□□□□ -1.59
LMX1BO60663 TMEM97P2-201ENST00000517841 403 ntBASIC5.12□□□□□ -1.59
LMX1BO60663 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.12□□□□□ -1.59
LMX1BO60663 AC130364.2-201ENST00000528639 604 ntBASIC5.12□□□□□ -1.59
LMX1BO60663 AC027544.3-201ENST00000535082 757 ntBASIC5.12□□□□□ -1.59
LMX1BO60663 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.12□□□□□ -1.59
LMX1BO60663 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.12□□□□□ -1.59
LMX1BO60663 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.12□□□□□ -1.59
LMX1BO60663 AL049874.4-201ENST00000557593 255 ntBASIC5.12□□□□□ -1.59
LMX1BO60663 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.12□□□□□ -1.59
LMX1BO60663 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC5.12□□□□□ -1.59
LMX1BO60663 AC011270.1-201ENST00000558606 583 ntBASIC5.12□□□□□ -1.59
LMX1BO60663 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.12□□□□□ -1.59
LMX1BO60663 AC007225.2-201ENST00000562529 256 ntBASIC5.12□□□□□ -1.59
LMX1BO60663 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.12□□□□□ -1.59
LMX1BO60663 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC5.12□□□□□ -1.59
LMX1BO60663 AC060780.2-201ENST00000589047 198 ntBASIC5.12□□□□□ -1.59
LMX1BO60663 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.12□□□□□ -1.59
LMX1BO60663 AC005776.1-201ENST00000603164 290 ntBASIC5.12□□□□□ -1.59
LMX1BO60663 AC087468.1-201ENST00000604365 630 ntBASIC5.12□□□□□ -1.59
LMX1BO60663 BNIP3P31-201ENST00000604515 566 ntBASIC5.12□□□□□ -1.59
LMX1BO60663 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LMX1BO60663 AL021918.2-201ENST00000613415 194 ntBASIC5.12□□□□□ -1.59
LMX1BO60663 AC022467.1-201ENST00000614738 749 ntBASIC5.12□□□□□ -1.59
LMX1BO60663 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.12□□□□□ -1.59
LMX1BO60663 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.12□□□□□ -1.59
LMX1BO60663 AC091046.2-201ENST00000620775 665 ntBASIC5.12□□□□□ -1.59
LMX1BO60663 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.12□□□□□ -1.59
LMX1BO60663 AC073488.3-201ENST00000631611 778 ntBASIC5.12□□□□□ -1.59
LMX1BO60663 AC008993.2-201ENST00000631744 806 ntBASIC5.12□□□□□ -1.59
LMX1BO60663 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.12□□□□□ -1.59
LMX1BO60663 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC5.12□□□□□ -1.59
LMX1BO60663 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LMX1BO60663 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.12□□□□□ -1.59
LMX1BO60663 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.12□□□□□ -1.59
LMX1BO60663 AC027279.4-201ENST00000624371 2072 ntBASIC5.12□□□□□ -1.59
LMX1BO60663 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LMX1BO60663 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.12□□□□□ -1.59
LMX1BO60663 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LMX1BO60663 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.12□□□□□ -1.59
LMX1BO60663 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LMX1BO60663 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LMX1BO60663 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.12□□□□□ -1.59
LMX1BO60663 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LMX1BO60663 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LMX1BO60663 CR788268.1-201ENST00000603931 1809 ntBASIC5.11□□□□□ -1.59
LMX1BO60663 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LMX1BO60663 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
LMX1BO60663 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
LMX1BO60663 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LMX1BO60663 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LMX1BO60663 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
LMX1BO60663 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
LMX1BO60663 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
LMX1BO60663 RNFT1P3-201ENST00000340898 1052 ntBASIC5.11□□□□□ -1.59
LMX1BO60663 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
LMX1BO60663 SDHDP6-201ENST00000414693 480 ntBASIC5.11□□□□□ -1.59
LMX1BO60663 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.11□□□□□ -1.59
LMX1BO60663 Z93019.1-201ENST00000416450 973 ntBASIC5.11□□□□□ -1.59
LMX1BO60663 AL121776.1-201ENST00000429337 372 ntBASIC5.11□□□□□ -1.59
LMX1BO60663 TUBB4BP6-201ENST00000437576 479 ntBASIC5.11□□□□□ -1.59
LMX1BO60663 MYO5BP2-201ENST00000449815 1277 ntBASIC5.11□□□□□ -1.59
LMX1BO60663 MTND5P8-201ENST00000449817 1083 ntBASIC5.11□□□□□ -1.59
LMX1BO60663 AL445665.1-202ENST00000452436 324 ntBASIC5.11□□□□□ -1.59
LMX1BO60663 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.11□□□□□ -1.59
LMX1BO60663 AC026348.1-201ENST00000462549 1053 ntBASIC5.11□□□□□ -1.59
LMX1BO60663 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.11□□□□□ -1.59
LMX1BO60663 AC092865.4-201ENST00000477936 615 ntBASIC5.11□□□□□ -1.59
LMX1BO60663 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LMX1BO60663 AC083795.1-201ENST00000491760 320 ntBASIC5.11□□□□□ -1.59
LMX1BO60663 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
LMX1BO60663 C1GALT1P2-201ENST00000510813 1104 ntBASIC5.11□□□□□ -1.59
LMX1BO60663 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LMX1BO60663 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.11□□□□□ -1.59
LMX1BO60663 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.11□□□□□ -1.59
LMX1BO60663 AC136777.2-201ENST00000522979 358 ntBASIC5.11□□□□□ -1.59
LMX1BO60663 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.11□□□□□ -1.59
LMX1BO60663 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.11□□□□□ -1.59
LMX1BO60663 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
LMX1BO60663 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.11□□□□□ -1.59
LMX1BO60663 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.11□□□□□ -1.59
LMX1BO60663 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.11□□□□□ -1.59
LMX1BO60663 GARSP1-201ENST00000570895 719 ntBASIC5.11□□□□□ -1.59
LMX1BO60663 TXNP4-201ENST00000575018 310 ntBASIC5.11□□□□□ -1.59
LMX1BO60663 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.11□□□□□ -1.59
LMX1BO60663 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.11□□□□□ -1.59
LMX1BO60663 AC096947.1-201ENST00000603233 470 ntBASIC5.11□□□□□ -1.59
LMX1BO60663 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.11□□□□□ -1.59
LMX1BO60663 OR4H6P-202ENST00000603819 340 ntBASIC5.11□□□□□ -1.59
LMX1BO60663 AC009237.12-201ENST00000604755 742 ntBASIC5.11□□□□□ -1.59
LMX1BO60663 AL133481.2-203ENST00000607558 139 ntBASIC5.11□□□□□ -1.59
LMX1BO60663 AL352984.2-201ENST00000611153 546 ntBASIC5.11□□□□□ -1.59
LMX1BO60663 AL512624.1-201ENST00000613638 469 ntBASIC5.11□□□□□ -1.59
LMX1BO60663 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
LMX1BO60663 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
LMX1BO60663 AC022960.3-201ENST00000619794 441 ntBASIC5.11□□□□□ -1.59
LMX1BO60663 AC096708.4-201ENST00000620563 552 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms