Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
USP29Q9HBJ7 AL359955.1-201ENST00000455242 3275 ntBASIC6.11□□□□□ -1.43
USP29Q9HBJ7 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
USP29Q9HBJ7 AC087565.3-202ENST00000642085 1603 ntBASIC6.11□□□□□ -1.43
USP29Q9HBJ7 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
USP29Q9HBJ7 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
USP29Q9HBJ7 KYNUP3-201ENST00000574386 1341 ntBASIC6.11□□□□□ -1.43
USP29Q9HBJ7 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
USP29Q9HBJ7 SNORA63.3-201ENST00000362682 132 ntBASIC6.11□□□□□ -1.43
USP29Q9HBJ7 RNA5SP510-201ENST00000364697 99 ntBASIC6.11□□□□□ -1.43
USP29Q9HBJ7 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
USP29Q9HBJ7 RNU6-316P-201ENST00000391027 107 ntBASIC6.11□□□□□ -1.43
USP29Q9HBJ7 SNORA17A-201ENST00000391185 133 ntBASIC6.11□□□□□ -1.43
USP29Q9HBJ7 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
USP29Q9HBJ7 AL096711.1-201ENST00000404780 554 ntBASIC6.11□□□□□ -1.43
USP29Q9HBJ7 CDY17P-201ENST00000414121 1282 ntBASIC6.11□□□□□ -1.43
USP29Q9HBJ7 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.11□□□□□ -1.43
USP29Q9HBJ7 RPS7P8-201ENST00000418311 581 ntBASIC6.11□□□□□ -1.43
USP29Q9HBJ7 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.11□□□□□ -1.43
USP29Q9HBJ7 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.11□□□□□ -1.43
USP29Q9HBJ7 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC6.11□□□□□ -1.43
USP29Q9HBJ7 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC6.11□□□□□ -1.43
USP29Q9HBJ7 AL645638.1-201ENST00000440519 361 ntBASIC6.11□□□□□ -1.43
USP29Q9HBJ7 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC6.11□□□□□ -1.43
USP29Q9HBJ7 OSTCP1-201ENST00000455507 450 ntBASIC6.11□□□□□ -1.43
USP29Q9HBJ7 EIF2S2P5-201ENST00000457635 968 ntBASIC6.11□□□□□ -1.43
USP29Q9HBJ7 AL603882.1-201ENST00000463059 681 ntBASIC6.11□□□□□ -1.43
USP29Q9HBJ7 AC083795.1-201ENST00000491760 320 ntBASIC6.11□□□□□ -1.43
USP29Q9HBJ7 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.11□□□□□ -1.43
USP29Q9HBJ7 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC6.11□□□□□ -1.43
USP29Q9HBJ7 HAUS1P1-201ENST00000505275 832 ntBASIC6.11□□□□□ -1.43
USP29Q9HBJ7 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.11□□□□□ -1.43
USP29Q9HBJ7 AC078899.1-201ENST00000521432 1185 ntBASIC6.11□□□□□ -1.43
USP29Q9HBJ7 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.11□□□□□ -1.43
USP29Q9HBJ7 AC007346.2-201ENST00000564816 892 ntBASIC6.11□□□□□ -1.43
USP29Q9HBJ7 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.11□□□□□ -1.43
USP29Q9HBJ7 MIR3614-201ENST00000581261 86 ntBASIC6.11□□□□□ -1.43
USP29Q9HBJ7 AC068768.2-201ENST00000602352 343 ntBASIC6.11□□□□□ -1.43
USP29Q9HBJ7 AC133794.1-201ENST00000602731 914 ntBASIC6.11□□□□□ -1.43
USP29Q9HBJ7 AC135178.6-201ENST00000605314 398 ntBASIC6.11□□□□□ -1.43
USP29Q9HBJ7 AP000894.4-201ENST00000610185 483 ntBASIC6.11□□□□□ -1.43
USP29Q9HBJ7 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
USP29Q9HBJ7 MIR6729-201ENST00000618194 65 ntBASIC6.11□□□□□ -1.43
USP29Q9HBJ7 SNORA17.5-201ENST00000630429 132 ntBASIC6.11□□□□□ -1.43
USP29Q9HBJ7 AC073488.3-201ENST00000631611 778 ntBASIC6.11□□□□□ -1.43
USP29Q9HBJ7 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.11□□□□□ -1.43
USP29Q9HBJ7 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.11□□□□□ -1.43
USP29Q9HBJ7 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC6.11□□□□□ -1.43
USP29Q9HBJ7 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
USP29Q9HBJ7 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
USP29Q9HBJ7 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
USP29Q9HBJ7 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
USP29Q9HBJ7 AC090220.1-201ENST00000593078 1699 ntBASIC6.1□□□□□ -1.43
USP29Q9HBJ7 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
USP29Q9HBJ7 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
USP29Q9HBJ7 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC6.1□□□□□ -1.43
USP29Q9HBJ7 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
USP29Q9HBJ7 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
USP29Q9HBJ7 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
USP29Q9HBJ7 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
USP29Q9HBJ7 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.1□□□□□ -1.43
USP29Q9HBJ7 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.1□□□□□ -1.43
USP29Q9HBJ7 AL354854.1-201ENST00000455940 1363 ntBASIC6.1□□□□□ -1.43
USP29Q9HBJ7 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.1□□□□□ -1.43
USP29Q9HBJ7 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
USP29Q9HBJ7 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
USP29Q9HBJ7 RN7SKP128-201ENST00000364270 303 ntBASIC6.1□□□□□ -1.43
USP29Q9HBJ7 SNORD51.1-201ENST00000365405 77 ntBASIC6.1□□□□□ -1.43
USP29Q9HBJ7 RNU6-40P-201ENST00000384254 107 ntBASIC6.1□□□□□ -1.43
USP29Q9HBJ7 AL031985.1-201ENST00000392713 418 ntBASIC6.1□□□□□ -1.43
USP29Q9HBJ7 AC005522.1-201ENST00000395416 346 ntBASIC6.1□□□□□ -1.43
USP29Q9HBJ7 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
USP29Q9HBJ7 AL356057.1-202ENST00000402263 756 ntBASIC6.1□□□□□ -1.43
USP29Q9HBJ7 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.1□□□□□ -1.43
USP29Q9HBJ7 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.1□□□□□ -1.43
USP29Q9HBJ7 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.1□□□□□ -1.43
USP29Q9HBJ7 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.1□□□□□ -1.43
USP29Q9HBJ7 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC6.1□□□□□ -1.43
USP29Q9HBJ7 RPL5P2-201ENST00000429598 854 ntBASIC6.1□□□□□ -1.43
USP29Q9HBJ7 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
USP29Q9HBJ7 AK3P5-201ENST00000432033 519 ntBASIC6.1□□□□□ -1.43
USP29Q9HBJ7 AL353662.1-201ENST00000439099 327 ntBASIC6.1□□□□□ -1.43
USP29Q9HBJ7 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.1□□□□□ -1.43
USP29Q9HBJ7 ACA64.1-201ENST00000459171 127 ntBASIC6.1□□□□□ -1.43
USP29Q9HBJ7 AC104164.1-201ENST00000460282 590 ntBASIC6.1□□□□□ -1.43
USP29Q9HBJ7 AC092865.4-201ENST00000477936 615 ntBASIC6.1□□□□□ -1.43
USP29Q9HBJ7 RPL38P3-201ENST00000484463 213 ntBASIC6.1□□□□□ -1.43
USP29Q9HBJ7 PPIAP19-201ENST00000486414 492 ntBASIC6.1□□□□□ -1.43
USP29Q9HBJ7 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
USP29Q9HBJ7 AC093801.2-201ENST00000503966 1050 ntBASIC6.1□□□□□ -1.43
USP29Q9HBJ7 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC6.1□□□□□ -1.43
USP29Q9HBJ7 AC010460.2-201ENST00000509054 677 ntBASIC6.1□□□□□ -1.43
USP29Q9HBJ7 AC106872.4-201ENST00000510050 523 ntBASIC6.1□□□□□ -1.43
USP29Q9HBJ7 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.1□□□□□ -1.43
USP29Q9HBJ7 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC6.1□□□□□ -1.43
USP29Q9HBJ7 AC113192.3-201ENST00000529152 742 ntBASIC6.1□□□□□ -1.43
USP29Q9HBJ7 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.1□□□□□ -1.43
USP29Q9HBJ7 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC6.1□□□□□ -1.43
USP29Q9HBJ7 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.1□□□□□ -1.43
USP29Q9HBJ7 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms