Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.77□□□□□ -1.33
TRIM55Q9BYV6 MRPS33P3-201ENST00000513456 322 ntBASIC6.77□□□□□ -1.33
TRIM55Q9BYV6 FABP5P12-201ENST00000515543 389 ntBASIC6.77□□□□□ -1.33
TRIM55Q9BYV6 MTCO1P47-201ENST00000523889 1271 ntBASIC6.77□□□□□ -1.33
TRIM55Q9BYV6 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC6.77□□□□□ -1.33
TRIM55Q9BYV6 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.77□□□□□ -1.33
TRIM55Q9BYV6 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC6.77□□□□□ -1.33
TRIM55Q9BYV6 GCSHP4-201ENST00000538792 439 ntBASIC6.77□□□□□ -1.33
TRIM55Q9BYV6 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC6.77□□□□□ -1.33
TRIM55Q9BYV6 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.77□□□□□ -1.33
TRIM55Q9BYV6 PIGPP4-201ENST00000584447 307 ntBASIC6.77□□□□□ -1.33
TRIM55Q9BYV6 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.77□□□□□ -1.33
TRIM55Q9BYV6 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC6.77□□□□□ -1.33
TRIM55Q9BYV6 Z99497.2-201ENST00000603634 310 ntBASIC6.77□□□□□ -1.33
TRIM55Q9BYV6 AC027271.1-201ENST00000610270 610 ntBASIC6.77□□□□□ -1.33
TRIM55Q9BYV6 AL352984.2-201ENST00000611153 546 ntBASIC6.77□□□□□ -1.33
TRIM55Q9BYV6 AC022106.1-201ENST00000612834 766 ntBASIC6.77□□□□□ -1.33
TRIM55Q9BYV6 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC6.77□□□□□ -1.33
TRIM55Q9BYV6 AL035661.1-201ENST00000620459 1144 ntBASIC6.77□□□□□ -1.33
TRIM55Q9BYV6 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC6.77□□□□□ -1.33
TRIM55Q9BYV6 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC6.77□□□□□ -1.33
TRIM55Q9BYV6 OR7E161P-202ENST00000641994 1033 ntBASIC6.77□□□□□ -1.33
TRIM55Q9BYV6 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
TRIM55Q9BYV6 AC006042.3-201ENST00000454684 1469 ntBASIC6.77□□□□□ -1.33
TRIM55Q9BYV6 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TRIM55Q9BYV6 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
TRIM55Q9BYV6 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
TRIM55Q9BYV6 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
TRIM55Q9BYV6 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
TRIM55Q9BYV6 AC009220.2-201ENST00000489759 1751 ntBASIC6.77□□□□□ -1.33
TRIM55Q9BYV6 AC034229.2-201ENST00000566945 2508 ntBASIC6.77□□□□□ -1.33
TRIM55Q9BYV6 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
TRIM55Q9BYV6 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
TRIM55Q9BYV6 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.77□□□□□ -1.33
TRIM55Q9BYV6 AC073365.1-203ENST00000641055 1992 ntBASIC6.77□□□□□ -1.33
TRIM55Q9BYV6 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 AP003170.5-201ENST00000397185 335 ntBASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 RAP1BP1-201ENST00000412709 553 ntBASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 MTND4P22-201ENST00000413116 1169 ntBASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 AC090960.1-201ENST00000421072 306 ntBASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 AC022022.1-201ENST00000430304 178 ntBASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 CRYGGP-201ENST00000443337 145 ntBASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 AC104978.1-201ENST00000449387 391 ntBASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 AL139156.3-201ENST00000454802 394 ntBASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 CCNJP2-201ENST00000457810 1163 ntBASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 RN7SL868P-201ENST00000485915 303 ntBASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 SNRPCP11-201ENST00000492453 205 ntBASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 AC090058.1-201ENST00000498788 435 ntBASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 RNU6-1129P-201ENST00000515964 104 ntBASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 IGKV2D-10-201ENST00000520194 281 ntBASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 IGHVIII-25-1-201ENST00000522143 241 ntBASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 MIR4470-201ENST00000583453 72 ntBASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 EIF1P6-201ENST00000600054 334 ntBASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 MRPS35P3-201ENST00000603189 709 ntBASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 MIR6780B-201ENST00000610307 79 ntBASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 AC009318.3-201ENST00000616916 503 ntBASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 AP000676.3-201ENST00000623299 569 ntBASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 AC026108.1-201ENST00000635444 547 ntBASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM55Q9BYV6 AC129502.1-201ENST00000623261 1654 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms