Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.65□□□□□ -1.5
PKP4Q99569 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
PKP4Q99569 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.65□□□□□ -1.5
PKP4Q99569 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.65□□□□□ -1.5
PKP4Q99569 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.65□□□□□ -1.5
PKP4Q99569 AL513327.3-201ENST00000602618 469 ntBASIC5.65□□□□□ -1.5
PKP4Q99569 BNIP3P7-201ENST00000605641 516 ntBASIC5.65□□□□□ -1.5
PKP4Q99569 AL031601.1-201ENST00000605702 394 ntBASIC5.65□□□□□ -1.5
PKP4Q99569 AC108865.2-201ENST00000606881 432 ntBASIC5.65□□□□□ -1.5
PKP4Q99569 AL133481.2-203ENST00000607558 139 ntBASIC5.65□□□□□ -1.5
PKP4Q99569 OR7M1P-201ENST00000608946 533 ntBASIC5.65□□□□□ -1.5
PKP4Q99569 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.65□□□□□ -1.5
PKP4Q99569 AL391597.1-201ENST00000618707 694 ntBASIC5.65□□□□□ -1.5
PKP4Q99569 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.65□□□□□ -1.5
PKP4Q99569 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.65□□□□□ -1.51
PKP4Q99569 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
PKP4Q99569 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
PKP4Q99569 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PKP4Q99569 AC083899.2-201ENST00000423285 1376 ntBASIC5.65□□□□□ -1.51
PKP4Q99569 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PKP4Q99569 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PKP4Q99569 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.64□□□□□ -1.51
PKP4Q99569 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.64□□□□□ -1.51
PKP4Q99569 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
PKP4Q99569 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PKP4Q99569 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PKP4Q99569 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PKP4Q99569 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
PKP4Q99569 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PKP4Q99569 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
PKP4Q99569 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.64□□□□□ -1.51
PKP4Q99569 SNORA79B-201ENST00000410557 148 ntBASIC5.64□□□□□ -1.51
PKP4Q99569 AC021876.1-201ENST00000425959 359 ntBASIC5.64□□□□□ -1.51
PKP4Q99569 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.64□□□□□ -1.51
PKP4Q99569 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.64□□□□□ -1.51
PKP4Q99569 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC5.64□□□□□ -1.51
PKP4Q99569 GAPDHP48-201ENST00000436626 961 ntBASIC5.64□□□□□ -1.51
PKP4Q99569 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.64□□□□□ -1.51
PKP4Q99569 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.64□□□□□ -1.51
PKP4Q99569 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.64□□□□□ -1.51
PKP4Q99569 PCNPP2-201ENST00000441651 455 ntBASIC5.64□□□□□ -1.51
PKP4Q99569 DNAJC19P5-201ENST00000443295 316 ntBASIC5.64□□□□□ -1.51
PKP4Q99569 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC5.64□□□□□ -1.51
PKP4Q99569 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.64□□□□□ -1.51
PKP4Q99569 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.64□□□□□ -1.51
PKP4Q99569 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.64□□□□□ -1.51
PKP4Q99569 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.64□□□□□ -1.51
PKP4Q99569 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC5.64□□□□□ -1.51
PKP4Q99569 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.64□□□□□ -1.51
PKP4Q99569 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.64□□□□□ -1.51
PKP4Q99569 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.64□□□□□ -1.51
PKP4Q99569 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.64□□□□□ -1.51
PKP4Q99569 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.64□□□□□ -1.51
PKP4Q99569 AC092121.1-201ENST00000569452 202 ntBASIC5.64□□□□□ -1.51
PKP4Q99569 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
PKP4Q99569 AL359742.1-201ENST00000622497 540 ntBASIC5.64□□□□□ -1.51
PKP4Q99569 AC129915.3-201ENST00000634128 948 ntBASIC5.64□□□□□ -1.51
PKP4Q99569 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.64□□□□□ -1.51
PKP4Q99569 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PKP4Q99569 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PKP4Q99569 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.64□□□□□ -1.51
PKP4Q99569 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
PKP4Q99569 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
PKP4Q99569 AC006484.1-201ENST00000435086 1884 ntBASIC5.64□□□□□ -1.51
PKP4Q99569 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PKP4Q99569 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PKP4Q99569 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PKP4Q99569 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
PKP4Q99569 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PKP4Q99569 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PKP4Q99569 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.63□□□□□ -1.51
PKP4Q99569 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
PKP4Q99569 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
PKP4Q99569 AL137141.1-201ENST00000624622 4836 ntBASIC5.63□□□□□ -1.51
PKP4Q99569 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PKP4Q99569 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PKP4Q99569 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PKP4Q99569 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PKP4Q99569 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PKP4Q99569 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PKP4Q99569 GAPDHP15-201ENST00000398586 975 ntBASIC5.63□□□□□ -1.51
PKP4Q99569 LYPLA1P3-201ENST00000402650 695 ntBASIC5.63□□□□□ -1.51
PKP4Q99569 AL357752.1-201ENST00000412817 349 ntBASIC5.63□□□□□ -1.51
PKP4Q99569 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.63□□□□□ -1.51
PKP4Q99569 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
PKP4Q99569 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.63□□□□□ -1.51
PKP4Q99569 KRT8P51-201ENST00000438938 274 ntBASIC5.63□□□□□ -1.51
PKP4Q99569 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.63□□□□□ -1.51
PKP4Q99569 SEPT7P3-201ENST00000455017 621 ntBASIC5.63□□□□□ -1.51
PKP4Q99569 RPL12P39-201ENST00000455456 496 ntBASIC5.63□□□□□ -1.51
PKP4Q99569 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.63□□□□□ -1.51
PKP4Q99569 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.63□□□□□ -1.51
PKP4Q99569 MTND6P32-201ENST00000457611 483 ntBASIC5.63□□□□□ -1.51
PKP4Q99569 NDUFA5P5-201ENST00000468361 342 ntBASIC5.63□□□□□ -1.51
PKP4Q99569 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.63□□□□□ -1.51
PKP4Q99569 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.63□□□□□ -1.51
PKP4Q99569 RPL37AP8-201ENST00000494116 276 ntBASIC5.63□□□□□ -1.51
PKP4Q99569 AC105384.2-201ENST00000508433 640 ntBASIC5.63□□□□□ -1.51
PKP4Q99569 AC139365.2-201ENST00000517972 253 ntBASIC5.63□□□□□ -1.51
PKP4Q99569 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms